Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
LMNAP02545 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.74■■□□□ 1.07
LMNAP02545 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
LMNAP02545 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.74■■□□□ 1.07
LMNAP02545 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.74■■□□□ 1.07
LMNAP02545 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.74■■□□□ 1.07
LMNAP02545 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.74■■□□□ 1.07
LMNAP02545 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.74■■□□□ 1.07
LMNAP02545 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.74■■□□□ 1.07
LMNAP02545 AC068587.7-201ENST00000641602 218 ntBASIC21.74■■□□□ 1.07
LMNAP02545 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LMNAP02545 KRT87P-202ENST00000534226 1464 ntBASIC21.74■■□□□ 1.07
LMNAP02545 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LMNAP02545 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
LMNAP02545 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LMNAP02545 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
LMNAP02545 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.73■■□□□ 1.07
LMNAP02545 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
LMNAP02545 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
LMNAP02545 ESRRAP1-201ENST00000400596 1257 ntBASIC21.73■■□□□ 1.07
LMNAP02545 CNN2P6-201ENST00000439038 900 ntBASIC21.73■■□□□ 1.07
LMNAP02545 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LMNAP02545 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.73■■□□□ 1.07
LMNAP02545 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LMNAP02545 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.73■■□□□ 1.07
LMNAP02545 AC073130.3-201ENST00000624389 2278 ntBASIC21.73■■□□□ 1.07
LMNAP02545 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LMNAP02545 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LMNAP02545 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LMNAP02545 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LMNAP02545 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.72■■□□□ 1.07
LMNAP02545 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LMNAP02545 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LMNAP02545 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LMNAP02545 AC092053.2-201ENST00000640557 1818 ntBASIC21.72■■□□□ 1.07
LMNAP02545 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.72■■□□□ 1.07
LMNAP02545 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
LMNAP02545 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.72■■□□□ 1.07
LMNAP02545 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LMNAP02545 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
LMNAP02545 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LMNAP02545 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LMNAP02545 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
LMNAP02545 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.72■■□□□ 1.07
LMNAP02545 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LMNAP02545 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
LMNAP02545 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
LMNAP02545 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
LMNAP02545 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LMNAP02545 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.71■■□□□ 1.07
LMNAP02545 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LMNAP02545 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.71■■□□□ 1.07
LMNAP02545 MIPEPP3-201ENST00000412105 444 ntBASIC21.71■■□□□ 1.07
LMNAP02545 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.71■■□□□ 1.07
LMNAP02545 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.71■■□□□ 1.07
LMNAP02545 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.71■■□□□ 1.07
LMNAP02545 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.71■■□□□ 1.07
LMNAP02545 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
LMNAP02545 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
LMNAP02545 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LMNAP02545 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
LMNAP02545 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
LMNAP02545 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
LMNAP02545 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LMNAP02545 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LMNAP02545 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.7■■□□□ 1.06
LMNAP02545 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.7■■□□□ 1.06
LMNAP02545 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.7■■□□□ 1.06
LMNAP02545 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LMNAP02545 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LMNAP02545 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
LMNAP02545 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.7■■□□□ 1.06
LMNAP02545 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.7■■□□□ 1.06
LMNAP02545 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LMNAP02545 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
LMNAP02545 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.69■■□□□ 1.06
LMNAP02545 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.69■■□□□ 1.06
LMNAP02545 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LMNAP02545 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
LMNAP02545 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LMNAP02545 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LMNAP02545 FBXW4P1-201ENST00000426721 2239 ntBASIC21.68■■□□□ 1.06
LMNAP02545 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LMNAP02545 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LMNAP02545 UNC93B4-201ENST00000505679 747 ntBASIC21.68■■□□□ 1.06
LMNAP02545 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LMNAP02545 AC092118.2-201ENST00000613495 667 ntBASIC21.68■■□□□ 1.06
LMNAP02545 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
LMNAP02545 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.68■■□□□ 1.06
LMNAP02545 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LMNAP02545 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
LMNAP02545 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LMNAP02545 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LMNAP02545 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.68■■□□□ 1.06
LMNAP02545 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LMNAP02545 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.67■■□□□ 1.06
LMNAP02545 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LMNAP02545 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.67■■□□□ 1.06
LMNAP02545 MKRN4P-201ENST00000444706 1521 ntBASIC21.67■■□□□ 1.06
LMNAP02545 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms