Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT6AP02538 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.21■□□□□ 0.83
KRT6AP02538 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.21■□□□□ 0.83
KRT6AP02538 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KRT6AP02538 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT6AP02538 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT6AP02538 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
KRT6AP02538 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
KRT6AP02538 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT6AP02538 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.2■□□□□ 0.82
KRT6AP02538 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KRT6AP02538 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
KRT6AP02538 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
KRT6AP02538 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT6AP02538 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
KRT6AP02538 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
KRT6AP02538 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.2■□□□□ 0.82
KRT6AP02538 AC142381.2-201ENST00000566120 298 ntBASIC20.2■□□□□ 0.82
KRT6AP02538 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
KRT6AP02538 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.2■□□□□ 0.82
KRT6AP02538 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KRT6AP02538 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.2■□□□□ 0.82
KRT6AP02538 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
KRT6AP02538 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
KRT6AP02538 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT6AP02538 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT6AP02538 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT6AP02538 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
KRT6AP02538 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.19■□□□□ 0.82
KRT6AP02538 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT6AP02538 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT6AP02538 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.19■□□□□ 0.82
KRT6AP02538 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.19■□□□□ 0.82
KRT6AP02538 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.19■□□□□ 0.82
KRT6AP02538 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KRT6AP02538 AL358852.1-201ENST00000623174 1268 ntBASIC20.19■□□□□ 0.82
KRT6AP02538 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.19■□□□□ 0.82
KRT6AP02538 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.19■□□□□ 0.82
KRT6AP02538 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT6AP02538 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
KRT6AP02538 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT6AP02538 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.19■□□□□ 0.82
KRT6AP02538 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
KRT6AP02538 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
KRT6AP02538 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.18■□□□□ 0.82
KRT6AP02538 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.18■□□□□ 0.82
KRT6AP02538 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT6AP02538 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.18■□□□□ 0.82
KRT6AP02538 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT6AP02538 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.18■□□□□ 0.82
KRT6AP02538 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT6AP02538 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT6AP02538 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT6AP02538 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.18■□□□□ 0.82
KRT6AP02538 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT6AP02538 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT6AP02538 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.17■□□□□ 0.82
KRT6AP02538 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.17■□□□□ 0.82
KRT6AP02538 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT6AP02538 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT6AP02538 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT6AP02538 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.17■□□□□ 0.82
KRT6AP02538 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
KRT6AP02538 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
KRT6AP02538 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT6AP02538 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.17■□□□□ 0.82
KRT6AP02538 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRT6AP02538 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRT6AP02538 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.17■□□□□ 0.82
KRT6AP02538 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.17■□□□□ 0.82
KRT6AP02538 AC053503.5-201ENST00000601508 636 ntBASIC20.17■□□□□ 0.82
KRT6AP02538 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
KRT6AP02538 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
KRT6AP02538 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.17■□□□□ 0.82
KRT6AP02538 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT6AP02538 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT6AP02538 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT6AP02538 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.17■□□□□ 0.82
KRT6AP02538 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
KRT6AP02538 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KRT6AP02538 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT6AP02538 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT6AP02538 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT6AP02538 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT6AP02538 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.16■□□□□ 0.82
KRT6AP02538 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT6AP02538 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KRT6AP02538 EEF1DP3-203ENST00000566025 782 ntBASIC20.16■□□□□ 0.82
KRT6AP02538 TPRG1LP1-201ENST00000598702 760 ntBASIC20.16■□□□□ 0.82
KRT6AP02538 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT6AP02538 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KRT6AP02538 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT6AP02538 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.16■□□□□ 0.82
KRT6AP02538 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT6AP02538 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT6AP02538 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT6AP02538 RNF165-205ENST00000588679 2904 ntBASIC20.16■□□□□ 0.82
KRT6AP02538 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
KRT6AP02538 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
KRT6AP02538 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms