Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DQB1P01920 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DQB1P01920 TNXA-203ENST00000507684 2038 ntBASIC18.08■□□□□ 0.49
HLA-DQB1P01920 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DQB1P01920 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DQB1P01920 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQB1P01920 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQB1P01920 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
HLA-DQB1P01920 AC092028.1-203ENST00000608262 953 ntBASIC18.08■□□□□ 0.48
HLA-DQB1P01920 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQB1P01920 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQB1P01920 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQB1P01920 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQB1P01920 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQB1P01920 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQB1P01920 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.08■□□□□ 0.48
HLA-DQB1P01920 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DQB1P01920 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB1P01920 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB1P01920 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.07■□□□□ 0.48
HLA-DQB1P01920 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
HLA-DQB1P01920 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB1P01920 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
HLA-DQB1P01920 AL512408.1-201ENST00000569378 2000 ntBASIC18.07■□□□□ 0.48
HLA-DQB1P01920 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB1P01920 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB1P01920 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
HLA-DQB1P01920 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.07■□□□□ 0.48
HLA-DQB1P01920 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.07■□□□□ 0.48
HLA-DQB1P01920 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB1P01920 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB1P01920 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
HLA-DQB1P01920 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB1P01920 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB1P01920 AC099778.1-201ENST00000568593 1911 ntBASIC18.07■□□□□ 0.48
HLA-DQB1P01920 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB1P01920 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB1P01920 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.07■□□□□ 0.48
HLA-DQB1P01920 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
HLA-DQB1P01920 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB1P01920 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB1P01920 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DQB1P01920 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.07■□□□□ 0.48
HLA-DQB1P01920 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQB1P01920 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQB1P01920 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQB1P01920 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQB1P01920 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQB1P01920 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQB1P01920 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
HLA-DQB1P01920 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
HLA-DQB1P01920 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
HLA-DQB1P01920 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.06■□□□□ 0.48
HLA-DQB1P01920 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQB1P01920 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQB1P01920 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
HLA-DQB1P01920 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQB1P01920 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.06■□□□□ 0.48
HLA-DQB1P01920 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.06■□□□□ 0.48
HLA-DQB1P01920 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.06■□□□□ 0.48
HLA-DQB1P01920 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
HLA-DQB1P01920 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQB1P01920 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQB1P01920 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DQB1P01920 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
HLA-DQB1P01920 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.06■□□□□ 0.48
HLA-DQB1P01920 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
HLA-DQB1P01920 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.05■□□□□ 0.48
HLA-DQB1P01920 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQB1P01920 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQB1P01920 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HLA-DQB1P01920 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQB1P01920 AC003102.1-202ENST00000563394 1796 ntBASIC18.05■□□□□ 0.48
HLA-DQB1P01920 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQB1P01920 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQB1P01920 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQB1P01920 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HLA-DQB1P01920 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQB1P01920 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
HLA-DQB1P01920 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQB1P01920 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQB1P01920 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQB1P01920 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.05■□□□□ 0.48
HLA-DQB1P01920 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.05■□□□□ 0.48
HLA-DQB1P01920 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.05■□□□□ 0.48
HLA-DQB1P01920 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQB1P01920 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
HLA-DQB1P01920 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DQB1P01920 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQB1P01920 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQB1P01920 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQB1P01920 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HLA-DQB1P01920 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQB1P01920 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.04■□□□□ 0.48
HLA-DQB1P01920 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQB1P01920 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQB1P01920 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQB1P01920 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DQB1P01920 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.04■□□□□ 0.48
HLA-DQB1P01920 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms