Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AL596275.1-201ENST00000423464 877 ntBASIC26.98■■□□□ 1.91
PTCD1O75127 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC26.98■■□□□ 1.91
PTCD1O75127 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC26.98■■□□□ 1.91
PTCD1O75127 CYP2T3P-201ENST00000601990 817 ntBASIC26.98■■□□□ 1.91
PTCD1O75127 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC26.98■■□□□ 1.91
PTCD1O75127 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC26.98■■□□□ 1.91
PTCD1O75127 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
PTCD1O75127 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC26.97■■□□□ 1.91
PTCD1O75127 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
PTCD1O75127 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC26.97■■□□□ 1.91
PTCD1O75127 AC245052.3-201ENST00000450182 901 ntBASIC26.97■■□□□ 1.91
PTCD1O75127 NME6-213ENST00000451657 871 ntTSL 2 BASIC26.97■■□□□ 1.91
PTCD1O75127 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC26.97■■□□□ 1.91
PTCD1O75127 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC26.97■■□□□ 1.91
PTCD1O75127 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
PTCD1O75127 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
PTCD1O75127 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
PTCD1O75127 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
PTCD1O75127 RPS2P4-201ENST00000476944 856 ntBASIC26.96■■□□□ 1.91
PTCD1O75127 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC26.96■■□□□ 1.91
PTCD1O75127 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
PTCD1O75127 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
PTCD1O75127 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
PTCD1O75127 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
PTCD1O75127 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC26.95■■□□□ 1.91
PTCD1O75127 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC26.95■■□□□ 1.9
PTCD1O75127 BAALC-201ENST00000297574 801 ntTSL 3 BASIC26.95■■□□□ 1.9
PTCD1O75127 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC26.95■■□□□ 1.9
PTCD1O75127 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC26.95■■□□□ 1.9
PTCD1O75127 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC26.94■■□□□ 1.9
PTCD1O75127 PEX7-202ENST00000367756 680 ntTSL 3 BASIC26.94■■□□□ 1.9
PTCD1O75127 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC26.94■■□□□ 1.9
PTCD1O75127 CDV3P1-201ENST00000471403 739 ntBASIC26.94■■□□□ 1.9
PTCD1O75127 UNC93B4-201ENST00000505679 747 ntBASIC26.94■■□□□ 1.9
PTCD1O75127 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC26.94■■□□□ 1.9
PTCD1O75127 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PTCD1O75127 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
PTCD1O75127 AC008403.3-201ENST00000598924 454 ntBASIC26.94■■□□□ 1.9
PTCD1O75127 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PTCD1O75127 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
PTCD1O75127 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
PTCD1O75127 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
PTCD1O75127 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PTCD1O75127 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PTCD1O75127 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC26.93■■□□□ 1.9
PTCD1O75127 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC26.93■■□□□ 1.9
PTCD1O75127 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
PTCD1O75127 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
PTCD1O75127 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC26.92■■□□□ 1.9
PTCD1O75127 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
PTCD1O75127 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PTCD1O75127 VMO1-204ENST00000441199 741 ntTSL 2 BASIC26.92■■□□□ 1.9
PTCD1O75127 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
PTCD1O75127 AC100791.3-201ENST00000617619 330 ntBASIC26.92■■□□□ 1.9
PTCD1O75127 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
PTCD1O75127 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC26.92■■□□□ 1.9
PTCD1O75127 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.91■■□□□ 1.9
PTCD1O75127 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC26.91■■□□□ 1.9
PTCD1O75127 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PTCD1O75127 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PTCD1O75127 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PTCD1O75127 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PTCD1O75127 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PTCD1O75127 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PTCD1O75127 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PTCD1O75127 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
PTCD1O75127 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PTCD1O75127 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC26.91■■□□□ 1.9
PTCD1O75127 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
PTCD1O75127 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC26.91■■□□□ 1.9
PTCD1O75127 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC26.91■■□□□ 1.9
PTCD1O75127 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC26.91■■□□□ 1.9
PTCD1O75127 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PTCD1O75127 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
PTCD1O75127 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PTCD1O75127 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PTCD1O75127 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PTCD1O75127 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PTCD1O75127 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PTCD1O75127 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
PTCD1O75127 AC068473.5-201ENST00000616428 2072 ntBASIC26.9■■□□□ 1.9
PTCD1O75127 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
PTCD1O75127 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC26.9■■□□□ 1.9
PTCD1O75127 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PTCD1O75127 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC26.9■■□□□ 1.9
PTCD1O75127 AC060766.5-201ENST00000590539 871 ntBASIC26.9■■□□□ 1.9
PTCD1O75127 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PTCD1O75127 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
PTCD1O75127 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PTCD1O75127 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PTCD1O75127 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC26.89■■□□□ 1.9
PTCD1O75127 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PTCD1O75127 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC26.89■■□□□ 1.9
PTCD1O75127 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
PTCD1O75127 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
PTCD1O75127 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
PTCD1O75127 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
PTCD1O75127 HLA-B-256ENST00000639848 1089 ntBASIC26.89■■□□□ 1.9
PTCD1O75127 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
PTCD1O75127 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC26.89■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms