Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
URB1O60287 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
URB1O60287 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.77■□□□□ 0.76
URB1O60287 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
URB1O60287 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.77■□□□□ 0.75
URB1O60287 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
URB1O60287 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.76■□□□□ 0.75
URB1O60287 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
URB1O60287 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
URB1O60287 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.76■□□□□ 0.75
URB1O60287 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
URB1O60287 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.76■□□□□ 0.75
URB1O60287 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
URB1O60287 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.76■□□□□ 0.75
URB1O60287 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
URB1O60287 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.76■□□□□ 0.75
URB1O60287 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
URB1O60287 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
URB1O60287 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
URB1O60287 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
URB1O60287 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
URB1O60287 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
URB1O60287 OR7E47P-201ENST00000546390 1422 ntBASIC19.76■□□□□ 0.75
URB1O60287 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
URB1O60287 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
URB1O60287 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
URB1O60287 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
URB1O60287 POM121L13P-201ENST00000422362 380 ntBASIC19.76■□□□□ 0.75
URB1O60287 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
URB1O60287 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.76■□□□□ 0.75
URB1O60287 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
URB1O60287 AC243732.1-201ENST00000612648 864 ntBASIC19.76■□□□□ 0.75
URB1O60287 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
URB1O60287 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
URB1O60287 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
URB1O60287 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
URB1O60287 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.75■□□□□ 0.75
URB1O60287 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.75■□□□□ 0.75
URB1O60287 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
URB1O60287 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
URB1O60287 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
URB1O60287 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
URB1O60287 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.75■□□□□ 0.75
URB1O60287 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.75■□□□□ 0.75
URB1O60287 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.75■□□□□ 0.75
URB1O60287 KRT18P35-201ENST00000510488 1269 ntBASIC19.75■□□□□ 0.75
URB1O60287 AL355075.4-201ENST00000554988 638 ntBASIC19.75■□□□□ 0.75
URB1O60287 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.75■□□□□ 0.75
URB1O60287 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
URB1O60287 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
URB1O60287 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.75■□□□□ 0.75
URB1O60287 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.75■□□□□ 0.75
URB1O60287 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
URB1O60287 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.74■□□□□ 0.75
URB1O60287 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
URB1O60287 AC087499.1-201ENST00000418141 1075 ntBASIC19.74■□□□□ 0.75
URB1O60287 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
URB1O60287 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.74■□□□□ 0.75
URB1O60287 HLA-B-256ENST00000639848 1089 ntBASIC19.74■□□□□ 0.75
URB1O60287 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
URB1O60287 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
URB1O60287 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
URB1O60287 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
URB1O60287 ARMC10P1-201ENST00000313754 855 ntBASIC19.74■□□□□ 0.75
URB1O60287 TSPY7P-201ENST00000431358 1114 ntBASIC19.74■□□□□ 0.75
URB1O60287 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.74■□□□□ 0.75
URB1O60287 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
URB1O60287 AC079089.2-201ENST00000531211 1277 ntBASIC19.74■□□□□ 0.75
URB1O60287 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.74■□□□□ 0.75
URB1O60287 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.74■□□□□ 0.75
URB1O60287 AC233702.5-201ENST00000584107 538 ntBASIC19.74■□□□□ 0.75
URB1O60287 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
URB1O60287 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
URB1O60287 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
URB1O60287 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
URB1O60287 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
URB1O60287 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
URB1O60287 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
URB1O60287 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.73■□□□□ 0.75
URB1O60287 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
URB1O60287 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
URB1O60287 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
URB1O60287 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
URB1O60287 AP006587.3-201ENST00000525742 1516 ntBASIC19.73■□□□□ 0.75
URB1O60287 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
URB1O60287 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
URB1O60287 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
URB1O60287 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
URB1O60287 RPS2P55-201ENST00000397318 883 ntBASIC19.72■□□□□ 0.75
URB1O60287 AC107956.1-201ENST00000494359 873 ntBASIC19.72■□□□□ 0.75
URB1O60287 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.72■□□□□ 0.75
URB1O60287 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
URB1O60287 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
URB1O60287 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
URB1O60287 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
URB1O60287 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
URB1O60287 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
URB1O60287 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
URB1O60287 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
URB1O60287 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms