Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAF3IP2O43734 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TRAF3IP2O43734 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAF3IP2O43734 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.64■□□□□ 0.57
TRAF3IP2O43734 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAF3IP2O43734 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.64■□□□□ 0.57
TRAF3IP2O43734 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAF3IP2O43734 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.63■□□□□ 0.57
TRAF3IP2O43734 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAF3IP2O43734 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
TRAF3IP2O43734 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAF3IP2O43734 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TRAF3IP2O43734 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAF3IP2O43734 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRAF3IP2O43734 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAF3IP2O43734 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TRAF3IP2O43734 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAF3IP2O43734 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAF3IP2O43734 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAF3IP2O43734 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAF3IP2O43734 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAF3IP2O43734 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAF3IP2O43734 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAF3IP2O43734 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TRAF3IP2O43734 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.63■□□□□ 0.57
TRAF3IP2O43734 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TRAF3IP2O43734 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAF3IP2O43734 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAF3IP2O43734 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.62■□□□□ 0.57
TRAF3IP2O43734 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TRAF3IP2O43734 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAF3IP2O43734 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAF3IP2O43734 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAF3IP2O43734 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TRAF3IP2O43734 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAF3IP2O43734 NTF6G-201ENST00000591094 616 ntBASIC18.62■□□□□ 0.57
TRAF3IP2O43734 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAF3IP2O43734 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAF3IP2O43734 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAF3IP2O43734 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAF3IP2O43734 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.62■□□□□ 0.57
TRAF3IP2O43734 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAF3IP2O43734 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.62■□□□□ 0.57
TRAF3IP2O43734 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAF3IP2O43734 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAF3IP2O43734 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAF3IP2O43734 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAF3IP2O43734 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAF3IP2O43734 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.61■□□□□ 0.57
TRAF3IP2O43734 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TRAF3IP2O43734 KRT16P2-201ENST00000414673 1423 ntBASIC18.61■□□□□ 0.57
TRAF3IP2O43734 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAF3IP2O43734 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.61■□□□□ 0.57
TRAF3IP2O43734 KRT19P1-201ENST00000405746 1186 ntBASIC18.61■□□□□ 0.57
TRAF3IP2O43734 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.61■□□□□ 0.57
TRAF3IP2O43734 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAF3IP2O43734 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.61■□□□□ 0.57
TRAF3IP2O43734 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TRAF3IP2O43734 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAF3IP2O43734 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAF3IP2O43734 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAF3IP2O43734 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAF3IP2O43734 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAF3IP2O43734 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAF3IP2O43734 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
TRAF3IP2O43734 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP2O43734 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP2O43734 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAF3IP2O43734 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAF3IP2O43734 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP2O43734 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP2O43734 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP2O43734 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAF3IP2O43734 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRAF3IP2O43734 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP2O43734 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP2O43734 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TRAF3IP2O43734 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP2O43734 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRAF3IP2O43734 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP2O43734 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAF3IP2O43734 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP2O43734 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAF3IP2O43734 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP2O43734 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP2O43734 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.6■□□□□ 0.57
TRAF3IP2O43734 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.6■□□□□ 0.57
TRAF3IP2O43734 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP2O43734 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAF3IP2O43734 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAF3IP2O43734 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TRAF3IP2O43734 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.59■□□□□ 0.57
TRAF3IP2O43734 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAF3IP2O43734 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAF3IP2O43734 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
TRAF3IP2O43734 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TRAF3IP2O43734 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAF3IP2O43734 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TRAF3IP2O43734 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAF3IP2O43734 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms