Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC7O00311 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CDC7O00311 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC7O00311 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC7O00311 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.51■□□□□ 0.87
CDC7O00311 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDC7O00311 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDC7O00311 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDC7O00311 PLK5-205ENST00000642079 1969 ntBASIC20.5■□□□□ 0.87
CDC7O00311 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CDC7O00311 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.5■□□□□ 0.87
CDC7O00311 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDC7O00311 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.5■□□□□ 0.87
CDC7O00311 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDC7O00311 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDC7O00311 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.5■□□□□ 0.87
CDC7O00311 KRT87P-202ENST00000534226 1464 ntBASIC20.5■□□□□ 0.87
CDC7O00311 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.49■□□□□ 0.87
CDC7O00311 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.49■□□□□ 0.87
CDC7O00311 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.49■□□□□ 0.87
CDC7O00311 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDC7O00311 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDC7O00311 ZNRF2P3-201ENST00000424200 374 ntBASIC20.49■□□□□ 0.87
CDC7O00311 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDC7O00311 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.49■□□□□ 0.87
CDC7O00311 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.49■□□□□ 0.87
CDC7O00311 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.49■□□□□ 0.87
CDC7O00311 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.48■□□□□ 0.87
CDC7O00311 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDC7O00311 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.48■□□□□ 0.87
CDC7O00311 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDC7O00311 LINC02228-203ENST00000641970 1355 ntBASIC20.48■□□□□ 0.87
CDC7O00311 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDC7O00311 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDC7O00311 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.48■□□□□ 0.87
CDC7O00311 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CDC7O00311 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CDC7O00311 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDC7O00311 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CDC7O00311 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.48■□□□□ 0.87
CDC7O00311 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.48■□□□□ 0.87
CDC7O00311 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDC7O00311 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CDC7O00311 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CDC7O00311 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CDC7O00311 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
CDC7O00311 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDC7O00311 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDC7O00311 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDC7O00311 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.47■□□□□ 0.87
CDC7O00311 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDC7O00311 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.47■□□□□ 0.87
CDC7O00311 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDC7O00311 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CDC7O00311 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDC7O00311 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.47■□□□□ 0.87
CDC7O00311 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.47■□□□□ 0.87
CDC7O00311 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDC7O00311 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDC7O00311 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDC7O00311 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDC7O00311 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CDC7O00311 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC7O00311 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CDC7O00311 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC7O00311 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CDC7O00311 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CDC7O00311 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CDC7O00311 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC7O00311 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC7O00311 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.46■□□□□ 0.87
CDC7O00311 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.46■□□□□ 0.87
CDC7O00311 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.46■□□□□ 0.87
CDC7O00311 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.46■□□□□ 0.87
CDC7O00311 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.46■□□□□ 0.87
CDC7O00311 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC7O00311 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC7O00311 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC7O00311 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CDC7O00311 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDC7O00311 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDC7O00311 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDC7O00311 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDC7O00311 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDC7O00311 AP004607.4-201ENST00000530158 1459 ntBASIC20.45■□□□□ 0.86
CDC7O00311 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDC7O00311 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDC7O00311 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDC7O00311 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CDC7O00311 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CDC7O00311 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.45■□□□□ 0.86
CDC7O00311 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDC7O00311 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDC7O00311 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDC7O00311 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
CDC7O00311 AC006128.1-201ENST00000624704 1661 ntBASIC20.45■□□□□ 0.86
CDC7O00311 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDC7O00311 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC7O00311 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDC7O00311 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms