Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.82■□□□□ 0.76
PDLIM1O00151 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDLIM1O00151 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.82■□□□□ 0.76
PDLIM1O00151 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.82■□□□□ 0.76
PDLIM1O00151 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDLIM1O00151 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDLIM1O00151 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDLIM1O00151 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.82■□□□□ 0.76
PDLIM1O00151 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
PDLIM1O00151 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDLIM1O00151 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PDLIM1O00151 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.82■□□□□ 0.76
PDLIM1O00151 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.82■□□□□ 0.76
PDLIM1O00151 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDLIM1O00151 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDLIM1O00151 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDLIM1O00151 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDLIM1O00151 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.82■□□□□ 0.76
PDLIM1O00151 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
PDLIM1O00151 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM1O00151 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
PDLIM1O00151 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM1O00151 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM1O00151 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.81■□□□□ 0.76
PDLIM1O00151 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM1O00151 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.81■□□□□ 0.76
PDLIM1O00151 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM1O00151 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM1O00151 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM1O00151 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM1O00151 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PDLIM1O00151 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDLIM1O00151 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.81■□□□□ 0.76
PDLIM1O00151 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.8■□□□□ 0.76
PDLIM1O00151 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.8■□□□□ 0.76
PDLIM1O00151 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDLIM1O00151 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.8■□□□□ 0.76
PDLIM1O00151 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.8■□□□□ 0.76
PDLIM1O00151 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDLIM1O00151 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDLIM1O00151 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
PDLIM1O00151 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.8■□□□□ 0.76
PDLIM1O00151 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.8■□□□□ 0.76
PDLIM1O00151 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.8■□□□□ 0.76
PDLIM1O00151 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDLIM1O00151 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
PDLIM1O00151 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDLIM1O00151 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.8■□□□□ 0.76
PDLIM1O00151 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.8■□□□□ 0.76
PDLIM1O00151 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDLIM1O00151 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.79■□□□□ 0.76
PDLIM1O00151 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM1O00151 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM1O00151 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM1O00151 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM1O00151 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM1O00151 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM1O00151 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM1O00151 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PDLIM1O00151 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
PDLIM1O00151 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM1O00151 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM1O00151 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.79■□□□□ 0.76
PDLIM1O00151 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.79■□□□□ 0.76
PDLIM1O00151 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.79■□□□□ 0.76
PDLIM1O00151 AC073314.1-201ENST00000568729 2216 ntBASIC19.79■□□□□ 0.76
PDLIM1O00151 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM1O00151 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PDLIM1O00151 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.78■□□□□ 0.76
PDLIM1O00151 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.78■□□□□ 0.76
PDLIM1O00151 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PDLIM1O00151 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.78■□□□□ 0.76
PDLIM1O00151 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM1O00151 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PDLIM1O00151 AC018445.3-201ENST00000624177 1945 ntBASIC19.78■□□□□ 0.76
PDLIM1O00151 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM1O00151 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.77■□□□□ 0.76
PDLIM1O00151 GABARAPL3-202ENST00000624044 1851 ntBASIC19.77■□□□□ 0.76
PDLIM1O00151 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.77■□□□□ 0.76
PDLIM1O00151 AP005212.1-201ENST00000581547 1997 ntBASIC19.77■□□□□ 0.76
PDLIM1O00151 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDLIM1O00151 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDLIM1O00151 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDLIM1O00151 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.77■□□□□ 0.76
PDLIM1O00151 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDLIM1O00151 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
PDLIM1O00151 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
PDLIM1O00151 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
PDLIM1O00151 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PDLIM1O00151 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
PDLIM1O00151 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PDLIM1O00151 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.77■□□□□ 0.75
PDLIM1O00151 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PDLIM1O00151 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDLIM1O00151 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PDLIM1O00151 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDLIM1O00151 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDLIM1O00151 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDLIM1O00151 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.76■□□□□ 0.75
PDLIM1O00151 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms