Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMX2-CTNND1H3BSU7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TMX2-CTNND1H3BSU7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMX2-CTNND1H3BSU7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TMX2-CTNND1H3BSU7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMX2-CTNND1H3BSU7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TMX2-CTNND1H3BSU7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMX2-CTNND1H3BSU7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMX2-CTNND1H3BSU7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.47■□□□□ 0.87
TMX2-CTNND1H3BSU7 CNN2P6-201ENST00000439038 900 ntBASIC20.47■□□□□ 0.87
TMX2-CTNND1H3BSU7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.47■□□□□ 0.87
TMX2-CTNND1H3BSU7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.47■□□□□ 0.87
TMX2-CTNND1H3BSU7 AL138781.1-201ENST00000566567 1274 ntBASIC20.47■□□□□ 0.87
TMX2-CTNND1H3BSU7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
TMX2-CTNND1H3BSU7 AC053503.5-201ENST00000601508 636 ntBASIC20.47■□□□□ 0.87
TMX2-CTNND1H3BSU7 AC120498.10-201ENST00000621827 505 ntBASIC20.47■□□□□ 0.87
TMX2-CTNND1H3BSU7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.47■□□□□ 0.87
TMX2-CTNND1H3BSU7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMX2-CTNND1H3BSU7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TMX2-CTNND1H3BSU7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMX2-CTNND1H3BSU7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TMX2-CTNND1H3BSU7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.46■□□□□ 0.87
TMX2-CTNND1H3BSU7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TMX2-CTNND1H3BSU7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TMX2-CTNND1H3BSU7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.46■□□□□ 0.87
TMX2-CTNND1H3BSU7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TMX2-CTNND1H3BSU7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TMX2-CTNND1H3BSU7 TERF1P5-201ENST00000477545 1207 ntBASIC20.46■□□□□ 0.87
TMX2-CTNND1H3BSU7 EEF1DP3-203ENST00000566025 782 ntBASIC20.46■□□□□ 0.87
TMX2-CTNND1H3BSU7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TMX2-CTNND1H3BSU7 AC026310.3-201ENST00000625186 2373 ntBASIC20.46■□□□□ 0.87
TMX2-CTNND1H3BSU7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TMX2-CTNND1H3BSU7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.46■□□□□ 0.87
TMX2-CTNND1H3BSU7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.46■□□□□ 0.87
TMX2-CTNND1H3BSU7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.46■□□□□ 0.87
TMX2-CTNND1H3BSU7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.45■□□□□ 0.86
TMX2-CTNND1H3BSU7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMX2-CTNND1H3BSU7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TMX2-CTNND1H3BSU7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMX2-CTNND1H3BSU7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TMX2-CTNND1H3BSU7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TMX2-CTNND1H3BSU7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMX2-CTNND1H3BSU7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.45■□□□□ 0.86
TMX2-CTNND1H3BSU7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.45■□□□□ 0.86
TMX2-CTNND1H3BSU7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.45■□□□□ 0.86
TMX2-CTNND1H3BSU7 FAM201B-201ENST00000458407 597 ntBASIC20.45■□□□□ 0.86
TMX2-CTNND1H3BSU7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
TMX2-CTNND1H3BSU7 MIR4758-201ENST00000577688 71 ntBASIC20.45■□□□□ 0.86
TMX2-CTNND1H3BSU7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.45■□□□□ 0.86
TMX2-CTNND1H3BSU7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMX2-CTNND1H3BSU7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
TMX2-CTNND1H3BSU7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMX2-CTNND1H3BSU7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TMX2-CTNND1H3BSU7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.45■□□□□ 0.86
TMX2-CTNND1H3BSU7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.45■□□□□ 0.86
TMX2-CTNND1H3BSU7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMX2-CTNND1H3BSU7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMX2-CTNND1H3BSU7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMX2-CTNND1H3BSU7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
TMX2-CTNND1H3BSU7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TMX2-CTNND1H3BSU7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
TMX2-CTNND1H3BSU7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMX2-CTNND1H3BSU7 TSPY20P-201ENST00000450910 630 ntBASIC20.44■□□□□ 0.86
TMX2-CTNND1H3BSU7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.44■□□□□ 0.86
TMX2-CTNND1H3BSU7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMX2-CTNND1H3BSU7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.44■□□□□ 0.86
TMX2-CTNND1H3BSU7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.44■□□□□ 0.86
TMX2-CTNND1H3BSU7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.44■□□□□ 0.86
TMX2-CTNND1H3BSU7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMX2-CTNND1H3BSU7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TMX2-CTNND1H3BSU7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.44■□□□□ 0.86
TMX2-CTNND1H3BSU7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TMX2-CTNND1H3BSU7 AL391422.3-201ENST00000603791 2761 ntBASIC20.43■□□□□ 0.86
TMX2-CTNND1H3BSU7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMX2-CTNND1H3BSU7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMX2-CTNND1H3BSU7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.43■□□□□ 0.86
TMX2-CTNND1H3BSU7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMX2-CTNND1H3BSU7 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.43■□□□□ 0.86
TMX2-CTNND1H3BSU7 AC007322.4-201ENST00000509611 723 ntBASIC20.43■□□□□ 0.86
TMX2-CTNND1H3BSU7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TMX2-CTNND1H3BSU7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.43■□□□□ 0.86
TMX2-CTNND1H3BSU7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMX2-CTNND1H3BSU7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMX2-CTNND1H3BSU7 AC008694.1-202ENST00000636953 945 ntBASIC20.43■□□□□ 0.86
TMX2-CTNND1H3BSU7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMX2-CTNND1H3BSU7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.43■□□□□ 0.86
TMX2-CTNND1H3BSU7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TMX2-CTNND1H3BSU7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMX2-CTNND1H3BSU7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMX2-CTNND1H3BSU7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMX2-CTNND1H3BSU7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
TMX2-CTNND1H3BSU7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.43■□□□□ 0.86
TMX2-CTNND1H3BSU7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMX2-CTNND1H3BSU7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMX2-CTNND1H3BSU7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TMX2-CTNND1H3BSU7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TMX2-CTNND1H3BSU7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.42■□□□□ 0.86
TMX2-CTNND1H3BSU7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.42■□□□□ 0.86
TMX2-CTNND1H3BSU7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.42■□□□□ 0.86
TMX2-CTNND1H3BSU7 OR10C1-204ENST00000622521 1039 ntBASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms