Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC24.69■■□□□ 1.54
TMEM88BA6NKF7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TMEM88BA6NKF7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TMEM88BA6NKF7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TMEM88BA6NKF7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC24.68■■□□□ 1.54
TMEM88BA6NKF7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
TMEM88BA6NKF7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.68■■□□□ 1.54
TMEM88BA6NKF7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TMEM88BA6NKF7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TMEM88BA6NKF7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC24.68■■□□□ 1.54
TMEM88BA6NKF7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC24.68■■□□□ 1.54
TMEM88BA6NKF7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC24.68■■□□□ 1.54
TMEM88BA6NKF7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC24.68■■□□□ 1.54
TMEM88BA6NKF7 AL139125.2-201ENST00000623134 1869 ntBASIC24.68■■□□□ 1.54
TMEM88BA6NKF7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC24.68■■□□□ 1.54
TMEM88BA6NKF7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.68■■□□□ 1.54
TMEM88BA6NKF7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.68■■□□□ 1.54
TMEM88BA6NKF7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TMEM88BA6NKF7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TMEM88BA6NKF7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC24.67■■□□□ 1.54
TMEM88BA6NKF7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TMEM88BA6NKF7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC24.67■■□□□ 1.54
TMEM88BA6NKF7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TMEM88BA6NKF7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC24.67■■□□□ 1.54
TMEM88BA6NKF7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC24.67■■□□□ 1.54
TMEM88BA6NKF7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC24.67■■□□□ 1.54
TMEM88BA6NKF7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC24.67■■□□□ 1.54
TMEM88BA6NKF7 AC026471.5-201ENST00000615068 467 ntBASIC24.67■■□□□ 1.54
TMEM88BA6NKF7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC24.67■■□□□ 1.54
TMEM88BA6NKF7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC24.66■■□□□ 1.54
TMEM88BA6NKF7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
TMEM88BA6NKF7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.66■■□□□ 1.54
TMEM88BA6NKF7 KRASP1-201ENST00000407852 552 ntBASIC24.66■■□□□ 1.54
TMEM88BA6NKF7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC24.66■■□□□ 1.54
TMEM88BA6NKF7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC24.66■■□□□ 1.54
TMEM88BA6NKF7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC24.66■■□□□ 1.54
TMEM88BA6NKF7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TMEM88BA6NKF7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
TMEM88BA6NKF7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
TMEM88BA6NKF7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC24.65■■□□□ 1.54
TMEM88BA6NKF7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
TMEM88BA6NKF7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
TMEM88BA6NKF7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TMEM88BA6NKF7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TMEM88BA6NKF7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
TMEM88BA6NKF7 AC005521.1-201ENST00000393351 872 ntBASIC24.65■■□□□ 1.54
TMEM88BA6NKF7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC24.65■■□□□ 1.54
TMEM88BA6NKF7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC24.65■■□□□ 1.54
TMEM88BA6NKF7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.65■■□□□ 1.54
TMEM88BA6NKF7 AP003071.4-201ENST00000562276 1284 ntBASIC24.65■■□□□ 1.54
TMEM88BA6NKF7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC24.65■■□□□ 1.54
TMEM88BA6NKF7 AC145285.6-201ENST00000604632 637 ntBASIC24.65■■□□□ 1.54
TMEM88BA6NKF7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC24.65■■□□□ 1.54
TMEM88BA6NKF7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
TMEM88BA6NKF7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC24.65■■□□□ 1.54
TMEM88BA6NKF7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
TMEM88BA6NKF7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.65■■□□□ 1.54
TMEM88BA6NKF7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
TMEM88BA6NKF7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TMEM88BA6NKF7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC24.64■■□□□ 1.54
TMEM88BA6NKF7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TMEM88BA6NKF7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC24.64■■□□□ 1.54
TMEM88BA6NKF7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.64■■□□□ 1.54
TMEM88BA6NKF7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
TMEM88BA6NKF7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TMEM88BA6NKF7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
TMEM88BA6NKF7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TMEM88BA6NKF7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
TMEM88BA6NKF7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
TMEM88BA6NKF7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TMEM88BA6NKF7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
TMEM88BA6NKF7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC24.64■■□□□ 1.54
TMEM88BA6NKF7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC24.64■■□□□ 1.54
TMEM88BA6NKF7 MIR6786-201ENST00000616843 113 ntBASIC24.64■■□□□ 1.54
TMEM88BA6NKF7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC24.64■■□□□ 1.53
TMEM88BA6NKF7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
TMEM88BA6NKF7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TMEM88BA6NKF7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.63■■□□□ 1.53
TMEM88BA6NKF7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TMEM88BA6NKF7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC24.63■■□□□ 1.53
TMEM88BA6NKF7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC24.63■■□□□ 1.53
TMEM88BA6NKF7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC24.63■■□□□ 1.53
TMEM88BA6NKF7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TMEM88BA6NKF7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC24.63■■□□□ 1.53
TMEM88BA6NKF7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TMEM88BA6NKF7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC24.63■■□□□ 1.53
TMEM88BA6NKF7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TMEM88BA6NKF7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
TMEM88BA6NKF7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TMEM88BA6NKF7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC24.62■■□□□ 1.53
TMEM88BA6NKF7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.62■■□□□ 1.53
TMEM88BA6NKF7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TMEM88BA6NKF7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC24.62■■□□□ 1.53
TMEM88BA6NKF7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TMEM88BA6NKF7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC24.62■■□□□ 1.53
TMEM88BA6NKF7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TMEM88BA6NKF7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
TMEM88BA6NKF7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TMEM88BA6NKF7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TMEM88BA6NKF7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms