Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SMIM9A6NGZ8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SMIM9A6NGZ8 UBE2DNL-204ENST00000602536 740 ntBASIC15.13■□□□□ 0.01
SMIM9A6NGZ8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SMIM9A6NGZ8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMIM9A6NGZ8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMIM9A6NGZ8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM9A6NGZ8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM9A6NGZ8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC15.12■□□□□ 0.01
SMIM9A6NGZ8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SMIM9A6NGZ8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM9A6NGZ8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM9A6NGZ8 AC061975.6-201ENST00000579045 1553 ntBASIC15.12■□□□□ 0.01
SMIM9A6NGZ8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM9A6NGZ8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM9A6NGZ8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SMIM9A6NGZ8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM9A6NGZ8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM9A6NGZ8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM9A6NGZ8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM9A6NGZ8 AC245052.3-201ENST00000450182 901 ntBASIC15.12■□□□□ 0.01
SMIM9A6NGZ8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC15.12■□□□□ 0.01
SMIM9A6NGZ8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.12■□□□□ 0.01
SMIM9A6NGZ8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.12■□□□□ 0.01
SMIM9A6NGZ8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.12■□□□□ 0.01
SMIM9A6NGZ8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.12■□□□□ 0.01
SMIM9A6NGZ8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM9A6NGZ8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC15.12■□□□□ 0.01
SMIM9A6NGZ8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SMIM9A6NGZ8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM9A6NGZ8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM9A6NGZ8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
SMIM9A6NGZ8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SMIM9A6NGZ8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM9A6NGZ8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC15.11■□□□□ 0.01
SMIM9A6NGZ8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM9A6NGZ8 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM9A6NGZ8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC15.11■□□□□ 0.01
SMIM9A6NGZ8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC15.11■□□□□ 0.01
SMIM9A6NGZ8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15.11■□□□□ 0.01
SMIM9A6NGZ8 SLC7A5P2-201ENST00000553010 536 ntBASIC15.11■□□□□ 0.01
SMIM9A6NGZ8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SMIM9A6NGZ8 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM9A6NGZ8 AC243732.1-201ENST00000612648 864 ntBASIC15.11■□□□□ 0.01
SMIM9A6NGZ8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC15.11■□□□□ 0.01
SMIM9A6NGZ8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM9A6NGZ8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM9A6NGZ8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC15.11■□□□□ 0.01
SMIM9A6NGZ8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SMIM9A6NGZ8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM9A6NGZ8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM9A6NGZ8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM9A6NGZ8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM9A6NGZ8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM9A6NGZ8 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM9A6NGZ8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC15.11■□□□□ 0.01
SMIM9A6NGZ8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 AC011767.1-201ENST00000617410 1153 ntBASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 ME2-206ENST00000638410 2289 ntTSL 5 BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 ME2-210ENST00000639255 2262 ntTSL 5 BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SMIM9A6NGZ8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
SMIM9A6NGZ8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM9A6NGZ8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC15.09■□□□□ 0.01
SMIM9A6NGZ8 FBXW4P1-201ENST00000426721 2239 ntBASIC15.09■□□□□ 0.01
SMIM9A6NGZ8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SMIM9A6NGZ8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM9A6NGZ8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM9A6NGZ8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM9A6NGZ8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM9A6NGZ8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM9A6NGZ8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM9A6NGZ8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM9A6NGZ8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC15.09■□□□□ 0.01
SMIM9A6NGZ8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms