Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM49BA6NDI0 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.05■■□□□ 1.28
TRIM49BA6NDI0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.05■■□□□ 1.28
TRIM49BA6NDI0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM49BA6NDI0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.05■■□□□ 1.28
TRIM49BA6NDI0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.05■■□□□ 1.28
TRIM49BA6NDI0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
TRIM49BA6NDI0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM49BA6NDI0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM49BA6NDI0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
TRIM49BA6NDI0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.04■■□□□ 1.28
TRIM49BA6NDI0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM49BA6NDI0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23.04■■□□□ 1.28
TRIM49BA6NDI0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM49BA6NDI0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
TRIM49BA6NDI0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.04■■□□□ 1.28
TRIM49BA6NDI0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.04■■□□□ 1.28
TRIM49BA6NDI0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM49BA6NDI0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM49BA6NDI0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC23.04■■□□□ 1.28
TRIM49BA6NDI0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM49BA6NDI0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.04■■□□□ 1.28
TRIM49BA6NDI0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC23.04■■□□□ 1.28
TRIM49BA6NDI0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM49BA6NDI0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM49BA6NDI0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM49BA6NDI0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM49BA6NDI0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM49BA6NDI0 AC006128.1-201ENST00000624704 1661 ntBASIC23.03■■□□□ 1.28
TRIM49BA6NDI0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.03■■□□□ 1.28
TRIM49BA6NDI0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
TRIM49BA6NDI0 IRS3P-201ENST00000223076 1006 ntBASIC23.03■■□□□ 1.28
TRIM49BA6NDI0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM49BA6NDI0 AC053503.5-201ENST00000601508 636 ntBASIC23.03■■□□□ 1.28
TRIM49BA6NDI0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
TRIM49BA6NDI0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM49BA6NDI0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
TRIM49BA6NDI0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM49BA6NDI0 FEM1AP1-201ENST00000431297 1995 ntBASIC23.03■■□□□ 1.28
TRIM49BA6NDI0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM49BA6NDI0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
TRIM49BA6NDI0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM49BA6NDI0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM49BA6NDI0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM49BA6NDI0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM49BA6NDI0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM49BA6NDI0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM49BA6NDI0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
TRIM49BA6NDI0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM49BA6NDI0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM49BA6NDI0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC23.02■■□□□ 1.28
TRIM49BA6NDI0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.02■■□□□ 1.28
TRIM49BA6NDI0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.02■■□□□ 1.28
TRIM49BA6NDI0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.02■■□□□ 1.28
TRIM49BA6NDI0 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.02■■□□□ 1.28
TRIM49BA6NDI0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM49BA6NDI0 AC092667.1-201ENST00000434301 2586 ntBASIC23.02■■□□□ 1.28
TRIM49BA6NDI0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.02■■□□□ 1.28
TRIM49BA6NDI0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.02■■□□□ 1.28
TRIM49BA6NDI0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM49BA6NDI0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.02■■□□□ 1.28
TRIM49BA6NDI0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
TRIM49BA6NDI0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM49BA6NDI0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM49BA6NDI0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM49BA6NDI0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.01■■□□□ 1.27
TRIM49BA6NDI0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM49BA6NDI0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC23.01■■□□□ 1.27
TRIM49BA6NDI0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.01■■□□□ 1.27
TRIM49BA6NDI0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM49BA6NDI0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM49BA6NDI0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC23■■□□□ 1.27
TRIM49BA6NDI0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC23■■□□□ 1.27
TRIM49BA6NDI0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23■■□□□ 1.27
TRIM49BA6NDI0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM49BA6NDI0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM49BA6NDI0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM49BA6NDI0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM49BA6NDI0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23■■□□□ 1.27
TRIM49BA6NDI0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM49BA6NDI0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23■■□□□ 1.27
TRIM49BA6NDI0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM49BA6NDI0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM49BA6NDI0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM49BA6NDI0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM49BA6NDI0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
TRIM49BA6NDI0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM49BA6NDI0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
TRIM49BA6NDI0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM49BA6NDI0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM49BA6NDI0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM49BA6NDI0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM49BA6NDI0 SLC25A24-204ENST00000569674 2357 ntBASIC22.99■■□□□ 1.27
TRIM49BA6NDI0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM49BA6NDI0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM49BA6NDI0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM49BA6NDI0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM49BA6NDI0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
TRIM49BA6NDI0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.99■■□□□ 1.27
TRIM49BA6NDI0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms