Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV5A0A0B4J249 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV5A0A0B4J249 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV5A0A0B4J249 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV5A0A0B4J249 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV5A0A0B4J249 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRAV5A0A0B4J249 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV5A0A0B4J249 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV5A0A0B4J249 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.21■□□□□ 0.19
TRAV5A0A0B4J249 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV5A0A0B4J249 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.21■□□□□ 0.19
TRAV5A0A0B4J249 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV5A0A0B4J249 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV5A0A0B4J249 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TRAV5A0A0B4J249 AC092171.4-201ENST00000609130 632 ntBASIC16.21■□□□□ 0.19
TRAV5A0A0B4J249 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV5A0A0B4J249 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV5A0A0B4J249 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV5A0A0B4J249 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV5A0A0B4J249 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.21■□□□□ 0.19
TRAV5A0A0B4J249 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV5A0A0B4J249 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.21■□□□□ 0.18
TRAV5A0A0B4J249 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.21■□□□□ 0.18
TRAV5A0A0B4J249 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.21■□□□□ 0.18
TRAV5A0A0B4J249 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV5A0A0B4J249 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.21■□□□□ 0.18
TRAV5A0A0B4J249 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.21■□□□□ 0.18
TRAV5A0A0B4J249 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV5A0A0B4J249 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV5A0A0B4J249 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV5A0A0B4J249 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV5A0A0B4J249 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV5A0A0B4J249 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV5A0A0B4J249 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV5A0A0B4J249 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV5A0A0B4J249 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV5A0A0B4J249 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV5A0A0B4J249 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC16.2■□□□□ 0.18
TRAV5A0A0B4J249 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV5A0A0B4J249 AFG3L1P-217ENST00000557444 2447 ntBASIC16.2■□□□□ 0.18
TRAV5A0A0B4J249 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV5A0A0B4J249 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV5A0A0B4J249 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
TRAV5A0A0B4J249 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV5A0A0B4J249 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV5A0A0B4J249 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV5A0A0B4J249 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV5A0A0B4J249 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV5A0A0B4J249 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV5A0A0B4J249 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV5A0A0B4J249 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV5A0A0B4J249 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRAV5A0A0B4J249 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRAV5A0A0B4J249 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV5A0A0B4J249 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV5A0A0B4J249 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV5A0A0B4J249 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV5A0A0B4J249 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRAV5A0A0B4J249 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TRAV5A0A0B4J249 SERBP1P1-201ENST00000396021 1160 ntBASIC16.19■□□□□ 0.18
TRAV5A0A0B4J249 SLC47A1P1-202ENST00000449666 945 ntBASIC16.19■□□□□ 0.18
TRAV5A0A0B4J249 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV5A0A0B4J249 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV5A0A0B4J249 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
TRAV5A0A0B4J249 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV5A0A0B4J249 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV5A0A0B4J249 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV5A0A0B4J249 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 AP005435.1-201ENST00000529293 1178 ntBASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 GRAMD4P7-201ENST00000578182 1232 ntBASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 AC121338.2-201ENST00000622535 1744 ntBASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 AC027702.1-201ENST00000563810 1770 ntBASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV5A0A0B4J249 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms