Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV3A0A0B4J244 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TRAV3A0A0B4J244 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV3A0A0B4J244 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TRAV3A0A0B4J244 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TRAV3A0A0B4J244 AC006128.1-201ENST00000624704 1661 ntBASIC16.83■□□□□ 0.28
TRAV3A0A0B4J244 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.83■□□□□ 0.28
TRAV3A0A0B4J244 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV3A0A0B4J244 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV3A0A0B4J244 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRAV3A0A0B4J244 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.82■□□□□ 0.28
TRAV3A0A0B4J244 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAV3A0A0B4J244 AP001330.3-201ENST00000520123 633 ntBASIC16.82■□□□□ 0.28
TRAV3A0A0B4J244 AC027682.1-201ENST00000562846 899 ntBASIC16.82■□□□□ 0.28
TRAV3A0A0B4J244 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TRAV3A0A0B4J244 AC106739.1-201ENST00000617035 715 ntBASIC16.82■□□□□ 0.28
TRAV3A0A0B4J244 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV3A0A0B4J244 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV3A0A0B4J244 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV3A0A0B4J244 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV3A0A0B4J244 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRAV3A0A0B4J244 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV3A0A0B4J244 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV3A0A0B4J244 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAV3A0A0B4J244 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV3A0A0B4J244 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV3A0A0B4J244 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV3A0A0B4J244 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV3A0A0B4J244 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV3A0A0B4J244 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV3A0A0B4J244 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV3A0A0B4J244 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.81■□□□□ 0.28
TRAV3A0A0B4J244 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV3A0A0B4J244 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV3A0A0B4J244 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRAV3A0A0B4J244 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV3A0A0B4J244 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TRAV3A0A0B4J244 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
TRAV3A0A0B4J244 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV3A0A0B4J244 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV3A0A0B4J244 BX005040.4-201ENST00000637145 1518 ntBASIC16.8■□□□□ 0.28
TRAV3A0A0B4J244 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV3A0A0B4J244 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV3A0A0B4J244 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRAV3A0A0B4J244 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAV3A0A0B4J244 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAV3A0A0B4J244 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV3A0A0B4J244 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAV3A0A0B4J244 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRAV3A0A0B4J244 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRAV3A0A0B4J244 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV3A0A0B4J244 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV3A0A0B4J244 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV3A0A0B4J244 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRAV3A0A0B4J244 AC110285.6-201ENST00000617652 491 ntBASIC16.8■□□□□ 0.28
TRAV3A0A0B4J244 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV3A0A0B4J244 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAV3A0A0B4J244 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV3A0A0B4J244 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV3A0A0B4J244 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV3A0A0B4J244 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAV3A0A0B4J244 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV3A0A0B4J244 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV3A0A0B4J244 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV3A0A0B4J244 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRAV3A0A0B4J244 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV3A0A0B4J244 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV3A0A0B4J244 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV3A0A0B4J244 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAV3A0A0B4J244 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAV3A0A0B4J244 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV3A0A0B4J244 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
TRAV3A0A0B4J244 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV3A0A0B4J244 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRAV3A0A0B4J244 AF213884.3-201ENST00000563833 479 ntBASIC16.79■□□□□ 0.28
TRAV3A0A0B4J244 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV3A0A0B4J244 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV3A0A0B4J244 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV3A0A0B4J244 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV3A0A0B4J244 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV3A0A0B4J244 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV3A0A0B4J244 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV3A0A0B4J244 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV3A0A0B4J244 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
TRAV3A0A0B4J244 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TRAV3A0A0B4J244 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV3A0A0B4J244 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV3A0A0B4J244 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 EDA-201ENST00000338901 1233 ntBASIC16.78■□□□□ 0.28
TRAV3A0A0B4J244 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms