Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAV19A0A0A6YYK7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.69■■□□□ 1.06
TRAV19A0A0A6YYK7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
TRAV19A0A0A6YYK7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAV19A0A0A6YYK7 MIR4651-201ENST00000582622 73 ntBASIC21.69■■□□□ 1.06
TRAV19A0A0A6YYK7 FAM21FP-204ENST00000608637 956 ntBASIC21.69■■□□□ 1.06
TRAV19A0A0A6YYK7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAV19A0A0A6YYK7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAV19A0A0A6YYK7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
TRAV19A0A0A6YYK7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRAV19A0A0A6YYK7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAV19A0A0A6YYK7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.68■■□□□ 1.06
TRAV19A0A0A6YYK7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAV19A0A0A6YYK7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.68■■□□□ 1.06
TRAV19A0A0A6YYK7 RNA5SP413-201ENST00000516373 109 ntBASIC21.68■■□□□ 1.06
TRAV19A0A0A6YYK7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.68■■□□□ 1.06
TRAV19A0A0A6YYK7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAV19A0A0A6YYK7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TRAV19A0A0A6YYK7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TRAV19A0A0A6YYK7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAV19A0A0A6YYK7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.68■■□□□ 1.06
TRAV19A0A0A6YYK7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAV19A0A0A6YYK7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
TRAV19A0A0A6YYK7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TRAV19A0A0A6YYK7 GUSBP5-202ENST00000510805 1989 ntBASIC21.67■■□□□ 1.06
TRAV19A0A0A6YYK7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRAV19A0A0A6YYK7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRAV19A0A0A6YYK7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
TRAV19A0A0A6YYK7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
TRAV19A0A0A6YYK7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRAV19A0A0A6YYK7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRAV19A0A0A6YYK7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRAV19A0A0A6YYK7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.67■■□□□ 1.06
TRAV19A0A0A6YYK7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TRAV19A0A0A6YYK7 FAM201B-201ENST00000458407 597 ntBASIC21.67■■□□□ 1.06
TRAV19A0A0A6YYK7 AC097658.1-201ENST00000475555 843 ntBASIC21.67■■□□□ 1.06
TRAV19A0A0A6YYK7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.67■■□□□ 1.06
TRAV19A0A0A6YYK7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.67■■□□□ 1.06
TRAV19A0A0A6YYK7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TRAV19A0A0A6YYK7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRAV19A0A0A6YYK7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.66■■□□□ 1.06
TRAV19A0A0A6YYK7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAV19A0A0A6YYK7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAV19A0A0A6YYK7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.66■■□□□ 1.06
TRAV19A0A0A6YYK7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRAV19A0A0A6YYK7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TRAV19A0A0A6YYK7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.66■■□□□ 1.06
TRAV19A0A0A6YYK7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.66■■□□□ 1.06
TRAV19A0A0A6YYK7 AC233723.2-201ENST00000623798 2106 ntBASIC21.66■■□□□ 1.06
TRAV19A0A0A6YYK7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAV19A0A0A6YYK7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAV19A0A0A6YYK7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRAV19A0A0A6YYK7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV19A0A0A6YYK7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV19A0A0A6YYK7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV19A0A0A6YYK7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV19A0A0A6YYK7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV19A0A0A6YYK7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV19A0A0A6YYK7 LSM12P1-201ENST00000411836 588 ntBASIC21.65■■□□□ 1.06
TRAV19A0A0A6YYK7 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.65■■□□□ 1.06
TRAV19A0A0A6YYK7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
TRAV19A0A0A6YYK7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.65■■□□□ 1.06
TRAV19A0A0A6YYK7 AC091874.3-201ENST00000512672 1195 ntBASIC21.65■■□□□ 1.06
TRAV19A0A0A6YYK7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.65■■□□□ 1.06
TRAV19A0A0A6YYK7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV19A0A0A6YYK7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.65■■□□□ 1.06
TRAV19A0A0A6YYK7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV19A0A0A6YYK7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV19A0A0A6YYK7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV19A0A0A6YYK7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV19A0A0A6YYK7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.65■■□□□ 1.06
TRAV19A0A0A6YYK7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV19A0A0A6YYK7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV19A0A0A6YYK7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TRAV19A0A0A6YYK7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRAV19A0A0A6YYK7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
TRAV19A0A0A6YYK7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.64■■□□□ 1.05
TRAV19A0A0A6YYK7 DUSP5P2-201ENST00000426873 1033 ntBASIC21.64■■□□□ 1.05
TRAV19A0A0A6YYK7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.64■■□□□ 1.05
TRAV19A0A0A6YYK7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.64■■□□□ 1.05
TRAV19A0A0A6YYK7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.64■■□□□ 1.05
TRAV19A0A0A6YYK7 AC083880.1-201ENST00000608266 535 ntBASIC21.64■■□□□ 1.05
TRAV19A0A0A6YYK7 MYC-209ENST00000641252 345 ntBASIC21.64■■□□□ 1.05
TRAV19A0A0A6YYK7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRAV19A0A0A6YYK7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRAV19A0A0A6YYK7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRAV19A0A0A6YYK7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRAV19A0A0A6YYK7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
TRAV19A0A0A6YYK7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
TRAV19A0A0A6YYK7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.64■■□□□ 1.05
TRAV19A0A0A6YYK7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRAV19A0A0A6YYK7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRAV19A0A0A6YYK7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRAV19A0A0A6YYK7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRAV19A0A0A6YYK7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRAV19A0A0A6YYK7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRAV19A0A0A6YYK7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRAV19A0A0A6YYK7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TRAV19A0A0A6YYK7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TRAV19A0A0A6YYK7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms