Protein–RNA interactions for Protein: A0A0A6YYJ0

MSANTD3-TMEFF1, Protein MSANTD3-TMEFF1, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1A0A0A6YYJ0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.74■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.73■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 MCRIP2P1-201ENST00000394346 511 ntBASIC20.73■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.73■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 PNMA6B-201ENST00000538162 1200 ntBASIC20.73■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.73■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 AC092368.3-202ENST00000574180 1591 ntBASIC20.72■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 KRT17P3-201ENST00000420566 1262 ntBASIC20.72■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.72■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.72■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.72■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.72■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.72■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.71■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 C11orf96-202ENST00000528572 1834 ntBASIC20.71■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 AC092053.2-201ENST00000640557 1818 ntBASIC20.71■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.71■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 MIR718-201ENST00000390190 70 ntBASIC20.71■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.71■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.71■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.71■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.71■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.71■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.71■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.71■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
MSANTD3-TMEFF1A0A0A6YYJ0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.7■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.7■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.7■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 KRT18P68-201ENST00000392293 1000 ntBASIC20.7■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.7■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.7■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.69■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 AC026471.6-201ENST00000622954 1905 ntBASIC20.69■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.69■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.69■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.69■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.69■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.69■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.69■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.69■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.69■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.69■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MSANTD3-TMEFF1A0A0A6YYJ0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms