Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD3-BMI1R4GMX3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.61■□□□□ 0.73
COMMD3-BMI1R4GMX3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD3-BMI1R4GMX3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.61■□□□□ 0.73
COMMD3-BMI1R4GMX3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.61■□□□□ 0.73
COMMD3-BMI1R4GMX3 RARRES2P1-201ENST00000474487 481 ntBASIC19.61■□□□□ 0.73
COMMD3-BMI1R4GMX3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
COMMD3-BMI1R4GMX3 MTDHP2-201ENST00000601468 714 ntBASIC19.61■□□□□ 0.73
COMMD3-BMI1R4GMX3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD3-BMI1R4GMX3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.61■□□□□ 0.73
COMMD3-BMI1R4GMX3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.61■□□□□ 0.73
COMMD3-BMI1R4GMX3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD3-BMI1R4GMX3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.61■□□□□ 0.73
COMMD3-BMI1R4GMX3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD3-BMI1R4GMX3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD3-BMI1R4GMX3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD3-BMI1R4GMX3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 MIR4787-201ENST00000607364 84 ntBASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD3-BMI1R4GMX3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
COMMD3-BMI1R4GMX3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COMMD3-BMI1R4GMX3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
COMMD3-BMI1R4GMX3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.58■□□□□ 0.73
COMMD3-BMI1R4GMX3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
COMMD3-BMI1R4GMX3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.58■□□□□ 0.72
COMMD3-BMI1R4GMX3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COMMD3-BMI1R4GMX3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
COMMD3-BMI1R4GMX3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
COMMD3-BMI1R4GMX3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
COMMD3-BMI1R4GMX3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COMMD3-BMI1R4GMX3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
COMMD3-BMI1R4GMX3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COMMD3-BMI1R4GMX3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
COMMD3-BMI1R4GMX3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COMMD3-BMI1R4GMX3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COMMD3-BMI1R4GMX3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
COMMD3-BMI1R4GMX3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
COMMD3-BMI1R4GMX3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COMMD3-BMI1R4GMX3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
COMMD3-BMI1R4GMX3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COMMD3-BMI1R4GMX3 AC009102.2-201ENST00000606772 1639 ntBASIC19.57■□□□□ 0.72
COMMD3-BMI1R4GMX3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COMMD3-BMI1R4GMX3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COMMD3-BMI1R4GMX3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COMMD3-BMI1R4GMX3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COMMD3-BMI1R4GMX3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
COMMD3-BMI1R4GMX3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
COMMD3-BMI1R4GMX3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms