Protein–RNA interactions for Protein: Q9Y5E3

PCDHB6, Protocadherin beta-6, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB6Q9Y5E3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHB6Q9Y5E3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB6Q9Y5E3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB6Q9Y5E3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
PCDHB6Q9Y5E3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB6Q9Y5E3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB6Q9Y5E3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB6Q9Y5E3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.86■■□□□ 1.41
PCDHB6Q9Y5E3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.86■■□□□ 1.41
PCDHB6Q9Y5E3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC23.86■■□□□ 1.41
PCDHB6Q9Y5E3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB6Q9Y5E3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB6Q9Y5E3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
PCDHB6Q9Y5E3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB6Q9Y5E3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
PCDHB6Q9Y5E3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB6Q9Y5E3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
PCDHB6Q9Y5E3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB6Q9Y5E3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB6Q9Y5E3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.85■■□□□ 1.41
PCDHB6Q9Y5E3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB6Q9Y5E3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.85■■□□□ 1.41
PCDHB6Q9Y5E3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.85■■□□□ 1.41
PCDHB6Q9Y5E3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.85■■□□□ 1.41
PCDHB6Q9Y5E3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.85■■□□□ 1.41
PCDHB6Q9Y5E3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.85■■□□□ 1.41
PCDHB6Q9Y5E3 AC138907.5-202ENST00000569484 235 ntBASIC23.85■■□□□ 1.41
PCDHB6Q9Y5E3 KRT18P61-201ENST00000585825 1298 ntBASIC23.85■■□□□ 1.41
PCDHB6Q9Y5E3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB6Q9Y5E3 AC104187.1-201ENST00000607510 612 ntBASIC23.85■■□□□ 1.41
PCDHB6Q9Y5E3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.85■■□□□ 1.41
PCDHB6Q9Y5E3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.85■■□□□ 1.41
PCDHB6Q9Y5E3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.85■■□□□ 1.41
PCDHB6Q9Y5E3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB6Q9Y5E3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
PCDHB6Q9Y5E3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB6Q9Y5E3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB6Q9Y5E3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB6Q9Y5E3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
PCDHB6Q9Y5E3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB6Q9Y5E3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB6Q9Y5E3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
PCDHB6Q9Y5E3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
PCDHB6Q9Y5E3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB6Q9Y5E3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC23.84■■□□□ 1.41
PCDHB6Q9Y5E3 AC004854.2-201ENST00000608450 1441 ntBASIC23.84■■□□□ 1.41
PCDHB6Q9Y5E3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB6Q9Y5E3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB6Q9Y5E3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB6Q9Y5E3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.83■■□□□ 1.41
PCDHB6Q9Y5E3 AP004607.4-201ENST00000530158 1459 ntBASIC23.83■■□□□ 1.41
PCDHB6Q9Y5E3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB6Q9Y5E3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.83■■□□□ 1.41
PCDHB6Q9Y5E3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.83■■□□□ 1.41
PCDHB6Q9Y5E3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.83■■□□□ 1.41
PCDHB6Q9Y5E3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB6Q9Y5E3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.83■■□□□ 1.41
PCDHB6Q9Y5E3 DUX4L2-201ENST00000561772 1275 ntBASIC23.83■■□□□ 1.41
PCDHB6Q9Y5E3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB6Q9Y5E3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.83■■□□□ 1.41
PCDHB6Q9Y5E3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.83■■□□□ 1.41
PCDHB6Q9Y5E3 DUX4L6-201ENST00000626483 1275 ntBASIC23.83■■□□□ 1.41
PCDHB6Q9Y5E3 DUX4L1-201ENST00000627662 1275 ntBASIC23.83■■□□□ 1.41
PCDHB6Q9Y5E3 DUX4L8-201ENST00000629013 1275 ntBASIC23.83■■□□□ 1.41
PCDHB6Q9Y5E3 DUX4L3-201ENST00000630187 1275 ntBASIC23.83■■□□□ 1.41
PCDHB6Q9Y5E3 DUX4L7-201ENST00000630678 1275 ntBASIC23.83■■□□□ 1.41
PCDHB6Q9Y5E3 DUX4L5-201ENST00000630834 1275 ntBASIC23.83■■□□□ 1.41
PCDHB6Q9Y5E3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.83■■□□□ 1.41
PCDHB6Q9Y5E3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
PCDHB6Q9Y5E3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.83■■□□□ 1.4
PCDHB6Q9Y5E3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PCDHB6Q9Y5E3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB6Q9Y5E3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB6Q9Y5E3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.82■■□□□ 1.4
PCDHB6Q9Y5E3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB6Q9Y5E3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB6Q9Y5E3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB6Q9Y5E3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB6Q9Y5E3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.82■■□□□ 1.4
PCDHB6Q9Y5E3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB6Q9Y5E3 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.82■■□□□ 1.4
PCDHB6Q9Y5E3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.82■■□□□ 1.4
PCDHB6Q9Y5E3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB6Q9Y5E3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB6Q9Y5E3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.82■■□□□ 1.4
PCDHB6Q9Y5E3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.82■■□□□ 1.4
PCDHB6Q9Y5E3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
PCDHB6Q9Y5E3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.82■■□□□ 1.4
PCDHB6Q9Y5E3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
PCDHB6Q9Y5E3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB6Q9Y5E3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB6Q9Y5E3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC23.81■■□□□ 1.4
PCDHB6Q9Y5E3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB6Q9Y5E3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
PCDHB6Q9Y5E3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
PCDHB6Q9Y5E3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB6Q9Y5E3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.81■■□□□ 1.4
PCDHB6Q9Y5E3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.81■■□□□ 1.4
PCDHB6Q9Y5E3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.81■■□□□ 1.4
PCDHB6Q9Y5E3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms