Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC22■■□□□ 1.11
YIPF1Q9Y548 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC22■■□□□ 1.11
YIPF1Q9Y548 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC22■■□□□ 1.11
YIPF1Q9Y548 AC083880.1-201ENST00000608266 535 ntBASIC22■■□□□ 1.11
YIPF1Q9Y548 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22■■□□□ 1.11
YIPF1Q9Y548 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22■■□□□ 1.11
YIPF1Q9Y548 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
YIPF1Q9Y548 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
YIPF1Q9Y548 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
YIPF1Q9Y548 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22■■□□□ 1.11
YIPF1Q9Y548 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
YIPF1Q9Y548 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
YIPF1Q9Y548 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
YIPF1Q9Y548 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
YIPF1Q9Y548 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
YIPF1Q9Y548 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
YIPF1Q9Y548 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
YIPF1Q9Y548 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
YIPF1Q9Y548 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
YIPF1Q9Y548 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.99■■□□□ 1.11
YIPF1Q9Y548 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.99■■□□□ 1.11
YIPF1Q9Y548 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.99■■□□□ 1.11
YIPF1Q9Y548 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
YIPF1Q9Y548 MYC-209ENST00000641252 345 ntBASIC21.99■■□□□ 1.11
YIPF1Q9Y548 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
YIPF1Q9Y548 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
YIPF1Q9Y548 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
YIPF1Q9Y548 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
YIPF1Q9Y548 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
YIPF1Q9Y548 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
YIPF1Q9Y548 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
YIPF1Q9Y548 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
YIPF1Q9Y548 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.98■■□□□ 1.11
YIPF1Q9Y548 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
YIPF1Q9Y548 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
YIPF1Q9Y548 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.98■■□□□ 1.11
YIPF1Q9Y548 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
YIPF1Q9Y548 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.98■■□□□ 1.11
YIPF1Q9Y548 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
YIPF1Q9Y548 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
YIPF1Q9Y548 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
YIPF1Q9Y548 AC242852.2-201ENST00000615738 1807 ntBASIC21.97■■□□□ 1.11
YIPF1Q9Y548 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
YIPF1Q9Y548 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
YIPF1Q9Y548 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.97■■□□□ 1.11
YIPF1Q9Y548 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
YIPF1Q9Y548 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
YIPF1Q9Y548 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
YIPF1Q9Y548 FAM201B-201ENST00000458407 597 ntBASIC21.97■■□□□ 1.11
YIPF1Q9Y548 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.97■■□□□ 1.11
YIPF1Q9Y548 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.97■■□□□ 1.11
YIPF1Q9Y548 AC091874.3-201ENST00000512672 1195 ntBASIC21.97■■□□□ 1.11
YIPF1Q9Y548 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.97■■□□□ 1.11
YIPF1Q9Y548 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.97■■□□□ 1.11
YIPF1Q9Y548 FAM21FP-204ENST00000608637 956 ntBASIC21.97■■□□□ 1.11
YIPF1Q9Y548 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
YIPF1Q9Y548 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
YIPF1Q9Y548 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.97■■□□□ 1.11
YIPF1Q9Y548 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
YIPF1Q9Y548 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
YIPF1Q9Y548 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
YIPF1Q9Y548 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
YIPF1Q9Y548 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.96■■□□□ 1.11
YIPF1Q9Y548 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.96■■□□□ 1.11
YIPF1Q9Y548 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
YIPF1Q9Y548 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
YIPF1Q9Y548 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
YIPF1Q9Y548 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
YIPF1Q9Y548 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
YIPF1Q9Y548 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
YIPF1Q9Y548 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.95■■□□□ 1.1
YIPF1Q9Y548 DUSP5P2-201ENST00000426873 1033 ntBASIC21.95■■□□□ 1.1
YIPF1Q9Y548 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.95■■□□□ 1.1
YIPF1Q9Y548 CDV3P1-201ENST00000471403 739 ntBASIC21.95■■□□□ 1.1
YIPF1Q9Y548 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.95■■□□□ 1.1
YIPF1Q9Y548 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
YIPF1Q9Y548 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.95■■□□□ 1.1
YIPF1Q9Y548 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.95■■□□□ 1.1
YIPF1Q9Y548 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
YIPF1Q9Y548 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
YIPF1Q9Y548 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
YIPF1Q9Y548 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
YIPF1Q9Y548 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
YIPF1Q9Y548 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.94■■□□□ 1.1
YIPF1Q9Y548 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
YIPF1Q9Y548 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.94■■□□□ 1.1
YIPF1Q9Y548 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
YIPF1Q9Y548 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.94■■□□□ 1.1
YIPF1Q9Y548 AC097658.1-201ENST00000475555 843 ntBASIC21.94■■□□□ 1.1
YIPF1Q9Y548 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
YIPF1Q9Y548 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
YIPF1Q9Y548 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
YIPF1Q9Y548 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.94■■□□□ 1.1
YIPF1Q9Y548 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
YIPF1Q9Y548 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
YIPF1Q9Y548 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
YIPF1Q9Y548 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.94■■□□□ 1.1
YIPF1Q9Y548 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
YIPF1Q9Y548 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
YIPF1Q9Y548 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms