Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.25■□□□□ 0.35
LSM5Q9Y4Y9 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
LSM5Q9Y4Y9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
LSM5Q9Y4Y9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSM5Q9Y4Y9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSM5Q9Y4Y9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSM5Q9Y4Y9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
LSM5Q9Y4Y9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSM5Q9Y4Y9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSM5Q9Y4Y9 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.24■□□□□ 0.35
LSM5Q9Y4Y9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSM5Q9Y4Y9 MIR6722-201ENST00000617286 78 ntBASIC17.24■□□□□ 0.35
LSM5Q9Y4Y9 AC074183.2-201ENST00000623112 922 ntBASIC17.24■□□□□ 0.35
LSM5Q9Y4Y9 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
LSM5Q9Y4Y9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
LSM5Q9Y4Y9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LSM5Q9Y4Y9 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.24■□□□□ 0.35
LSM5Q9Y4Y9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LSM5Q9Y4Y9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.24■□□□□ 0.35
LSM5Q9Y4Y9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LSM5Q9Y4Y9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.24■□□□□ 0.35
LSM5Q9Y4Y9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.24■□□□□ 0.35
LSM5Q9Y4Y9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LSM5Q9Y4Y9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 AC009102.2-201ENST00000606772 1639 ntBASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 AC010980.1-201ENST00000587192 1142 ntBASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 AC087289.5-201ENST00000586076 3175 ntBASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSM5Q9Y4Y9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSM5Q9Y4Y9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSM5Q9Y4Y9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.22■□□□□ 0.35
LSM5Q9Y4Y9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSM5Q9Y4Y9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSM5Q9Y4Y9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.22■□□□□ 0.35
LSM5Q9Y4Y9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSM5Q9Y4Y9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSM5Q9Y4Y9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSM5Q9Y4Y9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSM5Q9Y4Y9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.22■□□□□ 0.35
LSM5Q9Y4Y9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LSM5Q9Y4Y9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.22■□□□□ 0.35
LSM5Q9Y4Y9 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSM5Q9Y4Y9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSM5Q9Y4Y9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSM5Q9Y4Y9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSM5Q9Y4Y9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
LSM5Q9Y4Y9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LSM5Q9Y4Y9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.21■□□□□ 0.35
LSM5Q9Y4Y9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.21■□□□□ 0.35
LSM5Q9Y4Y9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
LSM5Q9Y4Y9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSM5Q9Y4Y9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
LSM5Q9Y4Y9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.21■□□□□ 0.35
LSM5Q9Y4Y9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSM5Q9Y4Y9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSM5Q9Y4Y9 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSM5Q9Y4Y9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSM5Q9Y4Y9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSM5Q9Y4Y9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.21■□□□□ 0.35
LSM5Q9Y4Y9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSM5Q9Y4Y9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSM5Q9Y4Y9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LSM5Q9Y4Y9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LSM5Q9Y4Y9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.21■□□□□ 0.35
LSM5Q9Y4Y9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.21■□□□□ 0.35
LSM5Q9Y4Y9 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSM5Q9Y4Y9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSM5Q9Y4Y9 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LSM5Q9Y4Y9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LSM5Q9Y4Y9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSM5Q9Y4Y9 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
LSM5Q9Y4Y9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms