Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 GABARAPL3-202ENST00000624044 1851 ntBASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 AC004448.1-201ENST00000458332 883 ntBASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.98□□□□□ -0.01
CHTOPQ9Y3Y2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHTOPQ9Y3Y2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHTOPQ9Y3Y2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CHTOPQ9Y3Y2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHTOPQ9Y3Y2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHTOPQ9Y3Y2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.97□□□□□ -0.01
CHTOPQ9Y3Y2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHTOPQ9Y3Y2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CHTOPQ9Y3Y2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CHTOPQ9Y3Y2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CHTOPQ9Y3Y2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHTOPQ9Y3Y2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHTOPQ9Y3Y2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHTOPQ9Y3Y2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHTOPQ9Y3Y2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHTOPQ9Y3Y2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHTOPQ9Y3Y2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.97□□□□□ -0.01
CHTOPQ9Y3Y2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHTOPQ9Y3Y2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHTOPQ9Y3Y2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHTOPQ9Y3Y2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC14.97□□□□□ -0.01
CHTOPQ9Y3Y2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHTOPQ9Y3Y2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHTOPQ9Y3Y2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC14.97□□□□□ -0.01
CHTOPQ9Y3Y2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CHTOPQ9Y3Y2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHTOPQ9Y3Y2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC14.96□□□□□ -0.01
CHTOPQ9Y3Y2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC14.96□□□□□ -0.01
CHTOPQ9Y3Y2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHTOPQ9Y3Y2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHTOPQ9Y3Y2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
CHTOPQ9Y3Y2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CHTOPQ9Y3Y2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHTOPQ9Y3Y2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHTOPQ9Y3Y2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHTOPQ9Y3Y2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC14.96□□□□□ -0.01
CHTOPQ9Y3Y2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CHTOPQ9Y3Y2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC14.96□□□□□ -0.01
CHTOPQ9Y3Y2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHTOPQ9Y3Y2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHTOPQ9Y3Y2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHTOPQ9Y3Y2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHTOPQ9Y3Y2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHTOPQ9Y3Y2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHTOPQ9Y3Y2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHTOPQ9Y3Y2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CHTOPQ9Y3Y2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC14.96□□□□□ -0.02
CHTOPQ9Y3Y2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.95□□□□□ -0.02
CHTOPQ9Y3Y2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CHTOPQ9Y3Y2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHTOPQ9Y3Y2 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHTOPQ9Y3Y2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.95□□□□□ -0.02
CHTOPQ9Y3Y2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC14.95□□□□□ -0.02
CHTOPQ9Y3Y2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHTOPQ9Y3Y2 AC005082.1-201ENST00000413042 2259 ntBASIC14.95□□□□□ -0.02
CHTOPQ9Y3Y2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHTOPQ9Y3Y2 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
CHTOPQ9Y3Y2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC14.95□□□□□ -0.02
CHTOPQ9Y3Y2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHTOPQ9Y3Y2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHTOPQ9Y3Y2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms