Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
STAG3Q9UJ98 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC30.32■■■□□ 2.44
STAG3Q9UJ98 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC30.32■■■□□ 2.44
STAG3Q9UJ98 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
STAG3Q9UJ98 AC092368.3-202ENST00000574180 1591 ntBASIC30.32■■■□□ 2.44
STAG3Q9UJ98 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC30.32■■■□□ 2.44
STAG3Q9UJ98 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
STAG3Q9UJ98 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
STAG3Q9UJ98 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
STAG3Q9UJ98 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
STAG3Q9UJ98 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
STAG3Q9UJ98 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC30.31■■■□□ 2.44
STAG3Q9UJ98 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC30.31■■■□□ 2.44
STAG3Q9UJ98 Z99916.2-201ENST00000604037 246 ntBASIC30.31■■■□□ 2.44
STAG3Q9UJ98 AC139530.1-201ENST00000575312 1977 ntBASIC30.31■■■□□ 2.44
STAG3Q9UJ98 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
STAG3Q9UJ98 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
STAG3Q9UJ98 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC30.3■■■□□ 2.44
STAG3Q9UJ98 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC30.3■■■□□ 2.44
STAG3Q9UJ98 RN7SL471P-201ENST00000580476 299 ntBASIC30.3■■■□□ 2.44
STAG3Q9UJ98 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC30.3■■■□□ 2.44
STAG3Q9UJ98 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC30.3■■■□□ 2.44
STAG3Q9UJ98 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
STAG3Q9UJ98 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
STAG3Q9UJ98 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC30.3■■■□□ 2.44
STAG3Q9UJ98 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
STAG3Q9UJ98 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
STAG3Q9UJ98 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
STAG3Q9UJ98 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
STAG3Q9UJ98 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
STAG3Q9UJ98 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
STAG3Q9UJ98 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
STAG3Q9UJ98 AC245052.3-201ENST00000450182 901 ntBASIC30.29■■■□□ 2.44
STAG3Q9UJ98 SNORA78-201ENST00000459373 127 ntBASIC30.29■■■□□ 2.44
STAG3Q9UJ98 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC30.29■■■□□ 2.44
STAG3Q9UJ98 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC30.29■■■□□ 2.44
STAG3Q9UJ98 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC30.29■■■□□ 2.44
STAG3Q9UJ98 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC30.29■■■□□ 2.44
STAG3Q9UJ98 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
STAG3Q9UJ98 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
STAG3Q9UJ98 AC003102.1-202ENST00000563394 1796 ntBASIC30.28■■■□□ 2.44
STAG3Q9UJ98 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC30.28■■■□□ 2.44
STAG3Q9UJ98 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
STAG3Q9UJ98 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
STAG3Q9UJ98 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
STAG3Q9UJ98 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
STAG3Q9UJ98 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
STAG3Q9UJ98 MCRIP2P1-201ENST00000394346 511 ntBASIC30.28■■■□□ 2.44
STAG3Q9UJ98 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC30.28■■■□□ 2.44
STAG3Q9UJ98 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
STAG3Q9UJ98 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC30.28■■■□□ 2.44
STAG3Q9UJ98 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
STAG3Q9UJ98 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC30.28■■■□□ 2.44
STAG3Q9UJ98 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
STAG3Q9UJ98 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC30.27■■■□□ 2.44
STAG3Q9UJ98 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
STAG3Q9UJ98 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC30.27■■■□□ 2.44
STAG3Q9UJ98 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
STAG3Q9UJ98 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
STAG3Q9UJ98 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC30.26■■■□□ 2.44
STAG3Q9UJ98 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
STAG3Q9UJ98 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC30.26■■■□□ 2.44
STAG3Q9UJ98 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.44
STAG3Q9UJ98 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
STAG3Q9UJ98 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
STAG3Q9UJ98 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC30.26■■■□□ 2.43
STAG3Q9UJ98 AC233263.1-201ENST00000578059 224 ntBASIC30.26■■■□□ 2.43
STAG3Q9UJ98 REXO1L12P-201ENST00000622156 912 ntBASIC30.26■■■□□ 2.43
STAG3Q9UJ98 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC30.26■■■□□ 2.43
STAG3Q9UJ98 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
STAG3Q9UJ98 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC30.26■■■□□ 2.43
STAG3Q9UJ98 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
STAG3Q9UJ98 MFF-205ENST00000354503 1085 ntTSL 2 BASIC30.25■■■□□ 2.43
STAG3Q9UJ98 MIR1224-201ENST00000408193 85 ntBASIC30.25■■■□□ 2.43
STAG3Q9UJ98 AC211429.1-201ENST00000415277 523 ntBASIC30.25■■■□□ 2.43
STAG3Q9UJ98 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC30.25■■■□□ 2.43
STAG3Q9UJ98 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
STAG3Q9UJ98 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC30.25■■■□□ 2.43
STAG3Q9UJ98 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC30.25■■■□□ 2.43
STAG3Q9UJ98 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC30.25■■■□□ 2.43
STAG3Q9UJ98 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
STAG3Q9UJ98 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
STAG3Q9UJ98 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
STAG3Q9UJ98 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
STAG3Q9UJ98 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC30.24■■■□□ 2.43
STAG3Q9UJ98 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC30.24■■■□□ 2.43
STAG3Q9UJ98 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
STAG3Q9UJ98 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC30.24■■■□□ 2.43
STAG3Q9UJ98 OR2A1-AS1-207ENST00000486094 819 ntBASIC30.24■■■□□ 2.43
STAG3Q9UJ98 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC30.24■■■□□ 2.43
STAG3Q9UJ98 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
STAG3Q9UJ98 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC30.23■■■□□ 2.43
STAG3Q9UJ98 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
STAG3Q9UJ98 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
STAG3Q9UJ98 SOX15-203ENST00000570788 1093 ntBASIC30.23■■■□□ 2.43
STAG3Q9UJ98 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC30.23■■■□□ 2.43
STAG3Q9UJ98 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
STAG3Q9UJ98 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC30.23■■■□□ 2.43
STAG3Q9UJ98 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC30.23■■■□□ 2.43
STAG3Q9UJ98 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms