Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 AC016405.3-201ENST00000607710 860 ntBASIC21.36■■□□□ 1.01
EBF1Q9UH73 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.36■■□□□ 1.01
EBF1Q9UH73 MYC-209ENST00000641252 345 ntBASIC21.36■■□□□ 1.01
EBF1Q9UH73 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
EBF1Q9UH73 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.36■■□□□ 1.01
EBF1Q9UH73 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EBF1Q9UH73 AC137767.1-201ENST00000602918 1920 ntBASIC21.35■■□□□ 1.01
EBF1Q9UH73 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EBF1Q9UH73 AC087742.1-201ENST00000575880 1738 ntBASIC21.35■■□□□ 1.01
EBF1Q9UH73 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EBF1Q9UH73 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
EBF1Q9UH73 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
EBF1Q9UH73 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
EBF1Q9UH73 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EBF1Q9UH73 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
EBF1Q9UH73 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
EBF1Q9UH73 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.35■■□□□ 1.01
EBF1Q9UH73 AC008175.2-201ENST00000612840 297 ntBASIC21.35■■□□□ 1.01
EBF1Q9UH73 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
EBF1Q9UH73 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EBF1Q9UH73 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
EBF1Q9UH73 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EBF1Q9UH73 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EBF1Q9UH73 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EBF1Q9UH73 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
EBF1Q9UH73 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EBF1Q9UH73 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.35■■□□□ 1.01
EBF1Q9UH73 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
EBF1Q9UH73 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.34■■□□□ 1.01
EBF1Q9UH73 AC007375.3-201ENST00000600936 2314 ntBASIC21.34■■□□□ 1.01
EBF1Q9UH73 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
EBF1Q9UH73 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
EBF1Q9UH73 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
EBF1Q9UH73 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EBF1Q9UH73 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EBF1Q9UH73 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
EBF1Q9UH73 BX276092.2-201ENST00000417668 665 ntBASIC21.34■■□□□ 1.01
EBF1Q9UH73 AC097658.1-201ENST00000475555 843 ntBASIC21.34■■□□□ 1.01
EBF1Q9UH73 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.34■■□□□ 1.01
EBF1Q9UH73 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.34■■□□□ 1.01
EBF1Q9UH73 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.34■■□□□ 1.01
EBF1Q9UH73 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.34■■□□□ 1.01
EBF1Q9UH73 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.34■■□□□ 1.01
EBF1Q9UH73 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EBF1Q9UH73 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
EBF1Q9UH73 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
EBF1Q9UH73 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
EBF1Q9UH73 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
EBF1Q9UH73 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
EBF1Q9UH73 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
EBF1Q9UH73 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.33■■□□□ 1.01
EBF1Q9UH73 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.33■■□□□ 1.01
EBF1Q9UH73 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.33■■□□□ 1.01
EBF1Q9UH73 AC083880.1-201ENST00000608266 535 ntBASIC21.33■■□□□ 1.01
EBF1Q9UH73 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
EBF1Q9UH73 SLC25A24-204ENST00000569674 2357 ntBASIC21.33■■□□□ 1
EBF1Q9UH73 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
EBF1Q9UH73 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.33■■□□□ 1
EBF1Q9UH73 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.33■■□□□ 1
EBF1Q9UH73 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
EBF1Q9UH73 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EBF1Q9UH73 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.32■■□□□ 1
EBF1Q9UH73 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.32■■□□□ 1
EBF1Q9UH73 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.32■■□□□ 1
EBF1Q9UH73 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.32■■□□□ 1
EBF1Q9UH73 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EBF1Q9UH73 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EBF1Q9UH73 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EBF1Q9UH73 POU5F1P4-201ENST00000413175 1085 ntBASIC21.32■■□□□ 1
EBF1Q9UH73 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.32■■□□□ 1
EBF1Q9UH73 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.32■■□□□ 1
EBF1Q9UH73 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.32■■□□□ 1
EBF1Q9UH73 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.32■■□□□ 1
EBF1Q9UH73 RARRES2P4-201ENST00000514074 484 ntBASIC21.32■■□□□ 1
EBF1Q9UH73 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.32■■□□□ 1
EBF1Q9UH73 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.32■■□□□ 1
EBF1Q9UH73 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.32■■□□□ 1
EBF1Q9UH73 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.32■■□□□ 1
EBF1Q9UH73 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.32■■□□□ 1
EBF1Q9UH73 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.32■■□□□ 1
EBF1Q9UH73 AP006294.2-201ENST00000641667 209 ntBASIC21.32■■□□□ 1
EBF1Q9UH73 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
EBF1Q9UH73 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EBF1Q9UH73 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EBF1Q9UH73 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
EBF1Q9UH73 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.31■■□□□ 1
EBF1Q9UH73 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EBF1Q9UH73 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.31■■□□□ 1
EBF1Q9UH73 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.31■■□□□ 1
EBF1Q9UH73 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.31■■□□□ 1
EBF1Q9UH73 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.31■■□□□ 1
EBF1Q9UH73 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.31■■□□□ 1
EBF1Q9UH73 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EBF1Q9UH73 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.3■■□□□ 1
EBF1Q9UH73 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.3■■□□□ 1
EBF1Q9UH73 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
EBF1Q9UH73 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EBF1Q9UH73 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.3■■□□□ 1
EBF1Q9UH73 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.3■■□□□ 1
EBF1Q9UH73 ESRRAP1-201ENST00000400596 1257 ntBASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms