Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.86■■□□□ 1.41
COL20A1Q9P218 AC091799.1-201ENST00000422823 811 ntBASIC23.86■■□□□ 1.41
COL20A1Q9P218 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.86■■□□□ 1.41
COL20A1Q9P218 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL20A1Q9P218 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.85■■□□□ 1.41
COL20A1Q9P218 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.85■■□□□ 1.41
COL20A1Q9P218 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.85■■□□□ 1.41
COL20A1Q9P218 AL512625.2-201ENST00000417533 625 ntBASIC23.85■■□□□ 1.41
COL20A1Q9P218 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.85■■□□□ 1.41
COL20A1Q9P218 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
COL20A1Q9P218 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.85■■□□□ 1.41
COL20A1Q9P218 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.85■■□□□ 1.41
COL20A1Q9P218 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.85■■□□□ 1.41
COL20A1Q9P218 AC069236.1-201ENST00000604339 616 ntBASIC23.85■■□□□ 1.41
COL20A1Q9P218 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL20A1Q9P218 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.84■■□□□ 1.41
COL20A1Q9P218 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL20A1Q9P218 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COL20A1Q9P218 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL20A1Q9P218 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL20A1Q9P218 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.84■■□□□ 1.41
COL20A1Q9P218 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL20A1Q9P218 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
COL20A1Q9P218 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL20A1Q9P218 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
COL20A1Q9P218 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COL20A1Q9P218 AL162412.1-201ENST00000567129 965 ntBASIC23.84■■□□□ 1.41
COL20A1Q9P218 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.84■■□□□ 1.41
COL20A1Q9P218 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL20A1Q9P218 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
COL20A1Q9P218 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COL20A1Q9P218 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
COL20A1Q9P218 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.83■■□□□ 1.41
COL20A1Q9P218 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.83■■□□□ 1.41
COL20A1Q9P218 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COL20A1Q9P218 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COL20A1Q9P218 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.83■■□□□ 1.41
COL20A1Q9P218 AC073210.2-201ENST00000430369 194 ntBASIC23.83■■□□□ 1.41
COL20A1Q9P218 RARRES2P4-201ENST00000514074 484 ntBASIC23.83■■□□□ 1.41
COL20A1Q9P218 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COL20A1Q9P218 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
COL20A1Q9P218 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL20A1Q9P218 ABHD17AP1-201ENST00000358206 933 ntBASIC23.82■■□□□ 1.4
COL20A1Q9P218 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.82■■□□□ 1.4
COL20A1Q9P218 KRT18P6-201ENST00000555540 1265 ntBASIC23.82■■□□□ 1.4
COL20A1Q9P218 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.82■■□□□ 1.4
COL20A1Q9P218 AC008694.1-202ENST00000636953 945 ntBASIC23.82■■□□□ 1.4
COL20A1Q9P218 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
COL20A1Q9P218 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
COL20A1Q9P218 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL20A1Q9P218 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL20A1Q9P218 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.81■■□□□ 1.4
COL20A1Q9P218 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL20A1Q9P218 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
COL20A1Q9P218 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
COL20A1Q9P218 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
COL20A1Q9P218 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL20A1Q9P218 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL20A1Q9P218 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.81■■□□□ 1.4
COL20A1Q9P218 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.81■■□□□ 1.4
COL20A1Q9P218 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL20A1Q9P218 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL20A1Q9P218 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.81■■□□□ 1.4
COL20A1Q9P218 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.81■■□□□ 1.4
COL20A1Q9P218 AC133041.1-202ENST00000642053 222 ntBASIC23.81■■□□□ 1.4
COL20A1Q9P218 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL20A1Q9P218 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL20A1Q9P218 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL20A1Q9P218 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL20A1Q9P218 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL20A1Q9P218 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL20A1Q9P218 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.8■■□□□ 1.4
COL20A1Q9P218 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
COL20A1Q9P218 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.8■■□□□ 1.4
COL20A1Q9P218 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
COL20A1Q9P218 CD99P1-205ENST00000527459 561 ntBASIC23.8■■□□□ 1.4
COL20A1Q9P218 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL20A1Q9P218 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.8■■□□□ 1.4
COL20A1Q9P218 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.8■■□□□ 1.4
COL20A1Q9P218 AC010980.2-201ENST00000587099 1412 ntBASIC23.8■■□□□ 1.4
COL20A1Q9P218 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.8■■□□□ 1.4
COL20A1Q9P218 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
COL20A1Q9P218 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL20A1Q9P218 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL20A1Q9P218 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.8■■□□□ 1.4
COL20A1Q9P218 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL20A1Q9P218 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL20A1Q9P218 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.79■■□□□ 1.4
COL20A1Q9P218 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.79■■□□□ 1.4
COL20A1Q9P218 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL20A1Q9P218 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC23.79■■□□□ 1.4
COL20A1Q9P218 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
COL20A1Q9P218 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.79■■□□□ 1.4
COL20A1Q9P218 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.79■■□□□ 1.4
COL20A1Q9P218 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.79■■□□□ 1.4
COL20A1Q9P218 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
COL20A1Q9P218 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL20A1Q9P218 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL20A1Q9P218 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL20A1Q9P218 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms