Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 AC012618.2-201ENST00000428058 849 ntBASIC26.82■■□□□ 1.88
TFCP2L1Q9NZI6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC26.82■■□□□ 1.88
TFCP2L1Q9NZI6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
TFCP2L1Q9NZI6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TFCP2L1Q9NZI6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
TFCP2L1Q9NZI6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TFCP2L1Q9NZI6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
TFCP2L1Q9NZI6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC26.81■■□□□ 1.88
TFCP2L1Q9NZI6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
TFCP2L1Q9NZI6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TFCP2L1Q9NZI6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC26.81■■□□□ 1.88
TFCP2L1Q9NZI6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC26.81■■□□□ 1.88
TFCP2L1Q9NZI6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC26.81■■□□□ 1.88
TFCP2L1Q9NZI6 RPS2P55-201ENST00000397318 883 ntBASIC26.81■■□□□ 1.88
TFCP2L1Q9NZI6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
TFCP2L1Q9NZI6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TFCP2L1Q9NZI6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC26.81■■□□□ 1.88
TFCP2L1Q9NZI6 AC107956.1-201ENST00000494359 873 ntBASIC26.81■■□□□ 1.88
TFCP2L1Q9NZI6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TFCP2L1Q9NZI6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC26.81■■□□□ 1.88
TFCP2L1Q9NZI6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC26.81■■□□□ 1.88
TFCP2L1Q9NZI6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
TFCP2L1Q9NZI6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
TFCP2L1Q9NZI6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC26.81■■□□□ 1.88
TFCP2L1Q9NZI6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
TFCP2L1Q9NZI6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
TFCP2L1Q9NZI6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC26.8■■□□□ 1.88
TFCP2L1Q9NZI6 SLC29A4P2-201ENST00000504749 1089 ntBASIC26.8■■□□□ 1.88
TFCP2L1Q9NZI6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC26.8■■□□□ 1.88
TFCP2L1Q9NZI6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC26.8■■□□□ 1.88
TFCP2L1Q9NZI6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC26.8■■□□□ 1.88
TFCP2L1Q9NZI6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
TFCP2L1Q9NZI6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
TFCP2L1Q9NZI6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TFCP2L1Q9NZI6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TFCP2L1Q9NZI6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
TFCP2L1Q9NZI6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TFCP2L1Q9NZI6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC26.79■■□□□ 1.88
TFCP2L1Q9NZI6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC26.79■■□□□ 1.88
TFCP2L1Q9NZI6 TK2-213ENST00000563369 882 ntTSL 5 BASIC26.79■■□□□ 1.88
TFCP2L1Q9NZI6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
TFCP2L1Q9NZI6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC26.79■■□□□ 1.88
TFCP2L1Q9NZI6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC26.79■■□□□ 1.88
TFCP2L1Q9NZI6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
TFCP2L1Q9NZI6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TFCP2L1Q9NZI6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
TFCP2L1Q9NZI6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC26.78■■□□□ 1.88
TFCP2L1Q9NZI6 AC091799.1-201ENST00000422823 811 ntBASIC26.78■■□□□ 1.88
TFCP2L1Q9NZI6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TFCP2L1Q9NZI6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC26.78■■□□□ 1.88
TFCP2L1Q9NZI6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.78■■□□□ 1.88
TFCP2L1Q9NZI6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
TFCP2L1Q9NZI6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC26.77■■□□□ 1.88
TFCP2L1Q9NZI6 ANOS2P-203ENST00000472227 1816 ntBASIC26.77■■□□□ 1.88
TFCP2L1Q9NZI6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.77■■□□□ 1.88
TFCP2L1Q9NZI6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TFCP2L1Q9NZI6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC26.77■■□□□ 1.88
TFCP2L1Q9NZI6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC26.77■■□□□ 1.88
TFCP2L1Q9NZI6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
TFCP2L1Q9NZI6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC26.77■■□□□ 1.88
TFCP2L1Q9NZI6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
TFCP2L1Q9NZI6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC26.77■■□□□ 1.88
TFCP2L1Q9NZI6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TFCP2L1Q9NZI6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
TFCP2L1Q9NZI6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
TFCP2L1Q9NZI6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
TFCP2L1Q9NZI6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
TFCP2L1Q9NZI6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
TFCP2L1Q9NZI6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
TFCP2L1Q9NZI6 MCRIP2P1-201ENST00000394346 511 ntBASIC26.76■■□□□ 1.87
TFCP2L1Q9NZI6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
TFCP2L1Q9NZI6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
TFCP2L1Q9NZI6 CDV3P1-201ENST00000471403 739 ntBASIC26.76■■□□□ 1.87
TFCP2L1Q9NZI6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
TFCP2L1Q9NZI6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
TFCP2L1Q9NZI6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
TFCP2L1Q9NZI6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
TFCP2L1Q9NZI6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
TFCP2L1Q9NZI6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TFCP2L1Q9NZI6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
TFCP2L1Q9NZI6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TFCP2L1Q9NZI6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
TFCP2L1Q9NZI6 AC087499.1-201ENST00000418141 1075 ntBASIC26.75■■□□□ 1.87
TFCP2L1Q9NZI6 POM121L13P-201ENST00000422362 380 ntBASIC26.75■■□□□ 1.87
TFCP2L1Q9NZI6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
TFCP2L1Q9NZI6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC26.75■■□□□ 1.87
TFCP2L1Q9NZI6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC26.75■■□□□ 1.87
TFCP2L1Q9NZI6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC26.75■■□□□ 1.87
TFCP2L1Q9NZI6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
TFCP2L1Q9NZI6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
TFCP2L1Q9NZI6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC26.75■■□□□ 1.87
TFCP2L1Q9NZI6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC26.75■■□□□ 1.87
TFCP2L1Q9NZI6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
TFCP2L1Q9NZI6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
TFCP2L1Q9NZI6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
TFCP2L1Q9NZI6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
TFCP2L1Q9NZI6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
TFCP2L1Q9NZI6 RCN1P1-201ENST00000400413 996 ntBASIC26.74■■□□□ 1.87
TFCP2L1Q9NZI6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC26.74■■□□□ 1.87
TFCP2L1Q9NZI6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC26.74■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms