Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 CLDN5-201ENST00000403084 2357 ntBASIC21.51■■□□□ 1.03
ATP13A1Q9HD20 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP13A1Q9HD20 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP13A1Q9HD20 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATP13A1Q9HD20 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATP13A1Q9HD20 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP13A1Q9HD20 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATP13A1Q9HD20 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.51■■□□□ 1.03
ATP13A1Q9HD20 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATP13A1Q9HD20 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.51■■□□□ 1.03
ATP13A1Q9HD20 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP13A1Q9HD20 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP13A1Q9HD20 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP13A1Q9HD20 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP13A1Q9HD20 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.51■■□□□ 1.03
ATP13A1Q9HD20 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
ATP13A1Q9HD20 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP13A1Q9HD20 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ATP13A1Q9HD20 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.5■■□□□ 1.03
ATP13A1Q9HD20 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP13A1Q9HD20 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
ATP13A1Q9HD20 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.5■■□□□ 1.03
ATP13A1Q9HD20 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.5■■□□□ 1.03
ATP13A1Q9HD20 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP13A1Q9HD20 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.5■■□□□ 1.03
ATP13A1Q9HD20 AC011767.1-201ENST00000617410 1153 ntBASIC21.5■■□□□ 1.03
ATP13A1Q9HD20 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.5■■□□□ 1.03
ATP13A1Q9HD20 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP13A1Q9HD20 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP13A1Q9HD20 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP13A1Q9HD20 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATP13A1Q9HD20 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP13A1Q9HD20 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
ATP13A1Q9HD20 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP13A1Q9HD20 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.49■■□□□ 1.03
ATP13A1Q9HD20 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATP13A1Q9HD20 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.49■■□□□ 1.03
ATP13A1Q9HD20 MFSD11-216ENST00000590393 1141 ntBASIC21.49■■□□□ 1.03
ATP13A1Q9HD20 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.49■■□□□ 1.03
ATP13A1Q9HD20 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATP13A1Q9HD20 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.49■■□□□ 1.03
ATP13A1Q9HD20 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATP13A1Q9HD20 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.49■■□□□ 1.03
ATP13A1Q9HD20 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP13A1Q9HD20 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.49■■□□□ 1.03
ATP13A1Q9HD20 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A1Q9HD20 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
ATP13A1Q9HD20 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A1Q9HD20 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
ATP13A1Q9HD20 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
ATP13A1Q9HD20 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.48■■□□□ 1.03
ATP13A1Q9HD20 AC080038.1-201ENST00000611274 1154 ntBASIC21.48■■□□□ 1.03
ATP13A1Q9HD20 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A1Q9HD20 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A1Q9HD20 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.48■■□□□ 1.03
ATP13A1Q9HD20 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A1Q9HD20 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A1Q9HD20 KRT16P2-201ENST00000414673 1423 ntBASIC21.47■■□□□ 1.03
ATP13A1Q9HD20 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A1Q9HD20 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.47■■□□□ 1.03
ATP13A1Q9HD20 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.47■■□□□ 1.03
ATP13A1Q9HD20 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A1Q9HD20 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A1Q9HD20 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.47■■□□□ 1.03
ATP13A1Q9HD20 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A1Q9HD20 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A1Q9HD20 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
ATP13A1Q9HD20 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A1Q9HD20 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A1Q9HD20 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A1Q9HD20 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.47■■□□□ 1.03
ATP13A1Q9HD20 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.47■■□□□ 1.03
ATP13A1Q9HD20 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.47■■□□□ 1.03
ATP13A1Q9HD20 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.47■■□□□ 1.03
ATP13A1Q9HD20 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
ATP13A1Q9HD20 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A1Q9HD20 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A1Q9HD20 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A1Q9HD20 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
ATP13A1Q9HD20 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
ATP13A1Q9HD20 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.47■■□□□ 1.03
ATP13A1Q9HD20 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A1Q9HD20 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP13A1Q9HD20 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATP13A1Q9HD20 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATP13A1Q9HD20 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.46■■□□□ 1.03
ATP13A1Q9HD20 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP13A1Q9HD20 SLC7A5P1-201ENST00000568957 537 ntBASIC21.46■■□□□ 1.03
ATP13A1Q9HD20 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.46■■□□□ 1.03
ATP13A1Q9HD20 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.46■■□□□ 1.03
ATP13A1Q9HD20 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
ATP13A1Q9HD20 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP13A1Q9HD20 AC007375.3-201ENST00000600936 2314 ntBASIC21.46■■□□□ 1.03
ATP13A1Q9HD20 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATP13A1Q9HD20 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.46■■□□□ 1.03
ATP13A1Q9HD20 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
ATP13A1Q9HD20 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
ATP13A1Q9HD20 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.03
ATP13A1Q9HD20 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP13A1Q9HD20 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms