Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SND1-IT1Q9HBX3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SND1-IT1Q9HBX3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC13.99□□□□□ -0.17
SND1-IT1Q9HBX3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SND1-IT1Q9HBX3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC13.99□□□□□ -0.17
SND1-IT1Q9HBX3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC13.99□□□□□ -0.17
SND1-IT1Q9HBX3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SND1-IT1Q9HBX3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SND1-IT1Q9HBX3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SND1-IT1Q9HBX3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SND1-IT1Q9HBX3 CD72-202ENST00000378430 585 ntTSL 3 BASIC13.99□□□□□ -0.17
SND1-IT1Q9HBX3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC13.99□□□□□ -0.17
SND1-IT1Q9HBX3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC13.99□□□□□ -0.17
SND1-IT1Q9HBX3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SND1-IT1Q9HBX3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
SND1-IT1Q9HBX3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SND1-IT1Q9HBX3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SND1-IT1Q9HBX3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC13.99□□□□□ -0.17
SND1-IT1Q9HBX3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SND1-IT1Q9HBX3 AC026471.6-201ENST00000622954 1905 ntBASIC13.99□□□□□ -0.17
SND1-IT1Q9HBX3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SND1-IT1Q9HBX3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SND1-IT1Q9HBX3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SND1-IT1Q9HBX3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SND1-IT1Q9HBX3 AL049796.1-201ENST00000565336 1766 ntBASIC13.99□□□□□ -0.17
SND1-IT1Q9HBX3 OR7E47P-201ENST00000546390 1422 ntBASIC13.98□□□□□ -0.17
SND1-IT1Q9HBX3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC13.98□□□□□ -0.17
SND1-IT1Q9HBX3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SND1-IT1Q9HBX3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC13.98□□□□□ -0.17
SND1-IT1Q9HBX3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SND1-IT1Q9HBX3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
SND1-IT1Q9HBX3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
SND1-IT1Q9HBX3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SND1-IT1Q9HBX3 GABARAPL3-202ENST00000624044 1851 ntBASIC13.98□□□□□ -0.17
SND1-IT1Q9HBX3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SND1-IT1Q9HBX3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SND1-IT1Q9HBX3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SND1-IT1Q9HBX3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SND1-IT1Q9HBX3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SND1-IT1Q9HBX3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC13.98□□□□□ -0.17
SND1-IT1Q9HBX3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC13.98□□□□□ -0.17
SND1-IT1Q9HBX3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SND1-IT1Q9HBX3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SND1-IT1Q9HBX3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SND1-IT1Q9HBX3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SND1-IT1Q9HBX3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SND1-IT1Q9HBX3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SND1-IT1Q9HBX3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SND1-IT1Q9HBX3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
SND1-IT1Q9HBX3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SND1-IT1Q9HBX3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 KRT125P-201ENST00000546827 989 ntBASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 AL031602.1-201ENST00000633169 911 ntBASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SND1-IT1Q9HBX3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
SND1-IT1Q9HBX3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC13.96□□□□□ -0.17
SND1-IT1Q9HBX3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
SND1-IT1Q9HBX3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC13.96□□□□□ -0.17
SND1-IT1Q9HBX3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SND1-IT1Q9HBX3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC13.96□□□□□ -0.17
SND1-IT1Q9HBX3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SND1-IT1Q9HBX3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SND1-IT1Q9HBX3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SND1-IT1Q9HBX3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC13.96□□□□□ -0.17
SND1-IT1Q9HBX3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SND1-IT1Q9HBX3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms