Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.66■□□□□ 0.9
POLR1BQ9H9Y6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.66■□□□□ 0.9
POLR1BQ9H9Y6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
POLR1BQ9H9Y6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.66■□□□□ 0.9
POLR1BQ9H9Y6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.66■□□□□ 0.9
POLR1BQ9H9Y6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1BQ9H9Y6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1BQ9H9Y6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1BQ9H9Y6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1BQ9H9Y6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1BQ9H9Y6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1BQ9H9Y6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
POLR1BQ9H9Y6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1BQ9H9Y6 AC073130.3-201ENST00000624389 2278 ntBASIC20.65■□□□□ 0.9
POLR1BQ9H9Y6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1BQ9H9Y6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1BQ9H9Y6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1BQ9H9Y6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1BQ9H9Y6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1BQ9H9Y6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
POLR1BQ9H9Y6 AL138781.1-201ENST00000566567 1274 ntBASIC20.65■□□□□ 0.9
POLR1BQ9H9Y6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1BQ9H9Y6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1BQ9H9Y6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR1BQ9H9Y6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.65■□□□□ 0.9
POLR1BQ9H9Y6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.64■□□□□ 0.9
POLR1BQ9H9Y6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
POLR1BQ9H9Y6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
POLR1BQ9H9Y6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
POLR1BQ9H9Y6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.89
POLR1BQ9H9Y6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
POLR1BQ9H9Y6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
POLR1BQ9H9Y6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
POLR1BQ9H9Y6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
POLR1BQ9H9Y6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
POLR1BQ9H9Y6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.64■□□□□ 0.89
POLR1BQ9H9Y6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR1BQ9H9Y6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR1BQ9H9Y6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR1BQ9H9Y6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR1BQ9H9Y6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
POLR1BQ9H9Y6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.63■□□□□ 0.89
POLR1BQ9H9Y6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR1BQ9H9Y6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.63■□□□□ 0.89
POLR1BQ9H9Y6 FAM201B-201ENST00000458407 597 ntBASIC20.63■□□□□ 0.89
POLR1BQ9H9Y6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
POLR1BQ9H9Y6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.63■□□□□ 0.89
POLR1BQ9H9Y6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
POLR1BQ9H9Y6 MYCNOS-205ENST00000641950 531 ntBASIC20.63■□□□□ 0.89
POLR1BQ9H9Y6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLR1BQ9H9Y6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.63■□□□□ 0.89
POLR1BQ9H9Y6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR1BQ9H9Y6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR1BQ9H9Y6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.62■□□□□ 0.89
POLR1BQ9H9Y6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.62■□□□□ 0.89
POLR1BQ9H9Y6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.62■□□□□ 0.89
POLR1BQ9H9Y6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR1BQ9H9Y6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR1BQ9H9Y6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLR1BQ9H9Y6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
POLR1BQ9H9Y6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
POLR1BQ9H9Y6 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.62■□□□□ 0.89
POLR1BQ9H9Y6 FBXW4P1-201ENST00000426721 2239 ntBASIC20.62■□□□□ 0.89
POLR1BQ9H9Y6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
POLR1BQ9H9Y6 C11orf96-202ENST00000528572 1834 ntBASIC20.62■□□□□ 0.89
POLR1BQ9H9Y6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.62■□□□□ 0.89
POLR1BQ9H9Y6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1BQ9H9Y6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
POLR1BQ9H9Y6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1BQ9H9Y6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.61■□□□□ 0.89
POLR1BQ9H9Y6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.61■□□□□ 0.89
POLR1BQ9H9Y6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1BQ9H9Y6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1BQ9H9Y6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1BQ9H9Y6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1BQ9H9Y6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
POLR1BQ9H9Y6 AC069152.1-201ENST00000438030 544 ntBASIC20.61■□□□□ 0.89
POLR1BQ9H9Y6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1BQ9H9Y6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.61■□□□□ 0.89
POLR1BQ9H9Y6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.61■□□□□ 0.89
POLR1BQ9H9Y6 AP001160.3-201ENST00000601484 763 ntBASIC20.61■□□□□ 0.89
POLR1BQ9H9Y6 AC133041.1-202ENST00000642053 222 ntBASIC20.61■□□□□ 0.89
POLR1BQ9H9Y6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1BQ9H9Y6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1BQ9H9Y6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1BQ9H9Y6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1BQ9H9Y6 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1BQ9H9Y6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
POLR1BQ9H9Y6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.61■□□□□ 0.89
POLR1BQ9H9Y6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1BQ9H9Y6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR1BQ9H9Y6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
POLR1BQ9H9Y6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
POLR1BQ9H9Y6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR1BQ9H9Y6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR1BQ9H9Y6 AF201337.1-201ENST00000520239 748 ntBASIC20.6■□□□□ 0.89
POLR1BQ9H9Y6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.6■□□□□ 0.89
POLR1BQ9H9Y6 MIR4651-201ENST00000582622 73 ntBASIC20.6■□□□□ 0.89
POLR1BQ9H9Y6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
POLR1BQ9H9Y6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms