Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
CHMP4BQ9H444 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC26.41■■□□□ 1.82
CHMP4BQ9H444 SP2-202ENST00000613139 908 ntTSL 5 BASIC26.41■■□□□ 1.82
CHMP4BQ9H444 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
CHMP4BQ9H444 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHMP4BQ9H444 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CHMP4BQ9H444 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHMP4BQ9H444 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CHMP4BQ9H444 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHMP4BQ9H444 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
CHMP4BQ9H444 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CHMP4BQ9H444 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC26.4■■□□□ 1.82
CHMP4BQ9H444 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC26.4■■□□□ 1.82
CHMP4BQ9H444 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC26.4■■□□□ 1.82
CHMP4BQ9H444 AC120498.10-201ENST00000621827 505 ntBASIC26.4■■□□□ 1.82
CHMP4BQ9H444 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC26.4■■□□□ 1.82
CHMP4BQ9H444 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
CHMP4BQ9H444 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC26.4■■□□□ 1.82
CHMP4BQ9H444 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CHMP4BQ9H444 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC26.4■■□□□ 1.82
CHMP4BQ9H444 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
CHMP4BQ9H444 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
CHMP4BQ9H444 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC26.39■■□□□ 1.82
CHMP4BQ9H444 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
CHMP4BQ9H444 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CHMP4BQ9H444 SERP1-208ENST00000491660 830 ntTSL 2 BASIC26.39■■□□□ 1.82
CHMP4BQ9H444 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC26.39■■□□□ 1.82
CHMP4BQ9H444 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CHMP4BQ9H444 RAB43-208ENST00000615093 783 ntTSL 5 BASIC26.39■■□□□ 1.82
CHMP4BQ9H444 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC26.39■■□□□ 1.82
CHMP4BQ9H444 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC26.39■■□□□ 1.81
CHMP4BQ9H444 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.81
CHMP4BQ9H444 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC26.39■■□□□ 1.81
CHMP4BQ9H444 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC26.39■■□□□ 1.81
CHMP4BQ9H444 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC26.39■■□□□ 1.81
CHMP4BQ9H444 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHMP4BQ9H444 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC26.38■■□□□ 1.81
CHMP4BQ9H444 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
CHMP4BQ9H444 ZNRF2P3-201ENST00000424200 374 ntBASIC26.38■■□□□ 1.81
CHMP4BQ9H444 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
CHMP4BQ9H444 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CHMP4BQ9H444 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHMP4BQ9H444 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHMP4BQ9H444 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CHMP4BQ9H444 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
CHMP4BQ9H444 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CHMP4BQ9H444 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CHMP4BQ9H444 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC26.37■■□□□ 1.81
CHMP4BQ9H444 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC26.37■■□□□ 1.81
CHMP4BQ9H444 LGR4-203ENST00000480977 492 ntTSL 2 BASIC26.37■■□□□ 1.81
CHMP4BQ9H444 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC26.37■■□□□ 1.81
CHMP4BQ9H444 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC26.37■■□□□ 1.81
CHMP4BQ9H444 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CHMP4BQ9H444 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC26.37■■□□□ 1.81
CHMP4BQ9H444 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CHMP4BQ9H444 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC26.37■■□□□ 1.81
CHMP4BQ9H444 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
CHMP4BQ9H444 PALM-207ENST00000590161 2137 ntTSL 4 BASIC26.36■■□□□ 1.81
CHMP4BQ9H444 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHMP4BQ9H444 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHMP4BQ9H444 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC26.36■■□□□ 1.81
CHMP4BQ9H444 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC26.36■■□□□ 1.81
CHMP4BQ9H444 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CHMP4BQ9H444 KRT16P2-201ENST00000414673 1423 ntBASIC26.36■■□□□ 1.81
CHMP4BQ9H444 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
CHMP4BQ9H444 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CHMP4BQ9H444 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CHMP4BQ9H444 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC26.36■■□□□ 1.81
CHMP4BQ9H444 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC26.35■■□□□ 1.81
CHMP4BQ9H444 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHMP4BQ9H444 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CHMP4BQ9H444 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC26.35■■□□□ 1.81
CHMP4BQ9H444 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
CHMP4BQ9H444 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHMP4BQ9H444 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHMP4BQ9H444 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHMP4BQ9H444 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CHMP4BQ9H444 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
CHMP4BQ9H444 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
CHMP4BQ9H444 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
CHMP4BQ9H444 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CHMP4BQ9H444 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHMP4BQ9H444 AC010141.2-201ENST00000452426 721 ntBASIC26.35■■□□□ 1.81
CHMP4BQ9H444 DUX4L2-201ENST00000561772 1275 ntBASIC26.35■■□□□ 1.81
CHMP4BQ9H444 AC061975.6-201ENST00000579045 1553 ntBASIC26.35■■□□□ 1.81
CHMP4BQ9H444 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC26.35■■□□□ 1.81
CHMP4BQ9H444 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC26.35■■□□□ 1.81
CHMP4BQ9H444 DUX4L6-201ENST00000626483 1275 ntBASIC26.35■■□□□ 1.81
CHMP4BQ9H444 DUX4L1-201ENST00000627662 1275 ntBASIC26.35■■□□□ 1.81
CHMP4BQ9H444 DUX4L8-201ENST00000629013 1275 ntBASIC26.35■■□□□ 1.81
CHMP4BQ9H444 DUX4L3-201ENST00000630187 1275 ntBASIC26.35■■□□□ 1.81
CHMP4BQ9H444 DUX4L7-201ENST00000630678 1275 ntBASIC26.35■■□□□ 1.81
CHMP4BQ9H444 DUX4L5-201ENST00000630834 1275 ntBASIC26.35■■□□□ 1.81
CHMP4BQ9H444 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHMP4BQ9H444 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHMP4BQ9H444 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHMP4BQ9H444 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC26.34■■□□□ 1.81
CHMP4BQ9H444 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC26.34■■□□□ 1.81
CHMP4BQ9H444 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CHMP4BQ9H444 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms