Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC27.43■■□□□ 1.98
PCDH11XQ9BZA7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC27.43■■□□□ 1.98
PCDH11XQ9BZA7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC27.43■■□□□ 1.98
PCDH11XQ9BZA7 USP36-216ENST00000589424 970 ntTSL 5 BASIC27.43■■□□□ 1.98
PCDH11XQ9BZA7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
PCDH11XQ9BZA7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
PCDH11XQ9BZA7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCDH11XQ9BZA7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
PCDH11XQ9BZA7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC27.43■■□□□ 1.98
PCDH11XQ9BZA7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC27.43■■□□□ 1.98
PCDH11XQ9BZA7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
PCDH11XQ9BZA7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC27.42■■□□□ 1.98
PCDH11XQ9BZA7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PCDH11XQ9BZA7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
PCDH11XQ9BZA7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC27.42■■□□□ 1.98
PCDH11XQ9BZA7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
PCDH11XQ9BZA7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC27.42■■□□□ 1.98
PCDH11XQ9BZA7 AL589743.5-201ENST00000616611 1050 ntBASIC27.42■■□□□ 1.98
PCDH11XQ9BZA7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC27.42■■□□□ 1.98
PCDH11XQ9BZA7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC27.42■■□□□ 1.98
PCDH11XQ9BZA7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
PCDH11XQ9BZA7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC27.42■■□□□ 1.98
PCDH11XQ9BZA7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
PCDH11XQ9BZA7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
PCDH11XQ9BZA7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
PCDH11XQ9BZA7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC27.42■■□□□ 1.98
PCDH11XQ9BZA7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC27.42■■□□□ 1.98
PCDH11XQ9BZA7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC27.41■■□□□ 1.98
PCDH11XQ9BZA7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PCDH11XQ9BZA7 MCRIP2P1-201ENST00000394346 511 ntBASIC27.41■■□□□ 1.98
PCDH11XQ9BZA7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
PCDH11XQ9BZA7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
PCDH11XQ9BZA7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PCDH11XQ9BZA7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
PCDH11XQ9BZA7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PCDH11XQ9BZA7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC27.41■■□□□ 1.98
PCDH11XQ9BZA7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC27.41■■□□□ 1.98
PCDH11XQ9BZA7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
PCDH11XQ9BZA7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC27.41■■□□□ 1.98
PCDH11XQ9BZA7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PCDH11XQ9BZA7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PCDH11XQ9BZA7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
PCDH11XQ9BZA7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC27.4■■□□□ 1.98
PCDH11XQ9BZA7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC27.4■■□□□ 1.98
PCDH11XQ9BZA7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PCDH11XQ9BZA7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC27.4■■□□□ 1.98
PCDH11XQ9BZA7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC27.4■■□□□ 1.98
PCDH11XQ9BZA7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC27.4■■□□□ 1.98
PCDH11XQ9BZA7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC27.4■■□□□ 1.98
PCDH11XQ9BZA7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC27.4■■□□□ 1.98
PCDH11XQ9BZA7 AL359736.2-201ENST00000621992 437 ntBASIC27.4■■□□□ 1.98
PCDH11XQ9BZA7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC27.39■■□□□ 1.98
PCDH11XQ9BZA7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
PCDH11XQ9BZA7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PCDH11XQ9BZA7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC27.39■■□□□ 1.97
PCDH11XQ9BZA7 C11orf96-202ENST00000528572 1834 ntBASIC27.39■■□□□ 1.97
PCDH11XQ9BZA7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC27.39■■□□□ 1.97
PCDH11XQ9BZA7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC27.39■■□□□ 1.97
PCDH11XQ9BZA7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC27.39■■□□□ 1.97
PCDH11XQ9BZA7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
PCDH11XQ9BZA7 AC008550.1-201ENST00000511500 884 ntBASIC27.39■■□□□ 1.97
PCDH11XQ9BZA7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC27.39■■□□□ 1.97
PCDH11XQ9BZA7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC27.39■■□□□ 1.97
PCDH11XQ9BZA7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC27.39■■□□□ 1.97
PCDH11XQ9BZA7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC27.38■■□□□ 1.97
PCDH11XQ9BZA7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC27.38■■□□□ 1.97
PCDH11XQ9BZA7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PCDH11XQ9BZA7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PCDH11XQ9BZA7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
PCDH11XQ9BZA7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC27.38■■□□□ 1.97
PCDH11XQ9BZA7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCDH11XQ9BZA7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC27.37■■□□□ 1.97
PCDH11XQ9BZA7 AC026471.6-201ENST00000622954 1905 ntBASIC27.37■■□□□ 1.97
PCDH11XQ9BZA7 SAPCD2P1-201ENST00000395413 1184 ntBASIC27.37■■□□□ 1.97
PCDH11XQ9BZA7 UBE2SP1-201ENST00000450587 669 ntBASIC27.37■■□□□ 1.97
PCDH11XQ9BZA7 PNMA6B-201ENST00000538162 1200 ntBASIC27.37■■□□□ 1.97
PCDH11XQ9BZA7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCDH11XQ9BZA7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
PCDH11XQ9BZA7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PCDH11XQ9BZA7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PCDH11XQ9BZA7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PCDH11XQ9BZA7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
PCDH11XQ9BZA7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PCDH11XQ9BZA7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PCDH11XQ9BZA7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PCDH11XQ9BZA7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
PCDH11XQ9BZA7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC27.36■■□□□ 1.97
PCDH11XQ9BZA7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC27.36■■□□□ 1.97
PCDH11XQ9BZA7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC27.36■■□□□ 1.97
PCDH11XQ9BZA7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PCDH11XQ9BZA7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC27.36■■□□□ 1.97
PCDH11XQ9BZA7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC27.36■■□□□ 1.97
PCDH11XQ9BZA7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC27.36■■□□□ 1.97
PCDH11XQ9BZA7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
PCDH11XQ9BZA7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC27.35■■□□□ 1.97
PCDH11XQ9BZA7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC27.35■■□□□ 1.97
PCDH11XQ9BZA7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC27.35■■□□□ 1.97
PCDH11XQ9BZA7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC27.35■■□□□ 1.97
PCDH11XQ9BZA7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCDH11XQ9BZA7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms