Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RTFDC1Q9BY42 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RTFDC1Q9BY42 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC25.69■■□□□ 1.7
RTFDC1Q9BY42 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RTFDC1Q9BY42 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
RTFDC1Q9BY42 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
RTFDC1Q9BY42 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RTFDC1Q9BY42 PEX7-202ENST00000367756 680 ntTSL 3 BASIC25.68■■□□□ 1.7
RTFDC1Q9BY42 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RTFDC1Q9BY42 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC25.68■■□□□ 1.7
RTFDC1Q9BY42 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
RTFDC1Q9BY42 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
RTFDC1Q9BY42 MME-217ENST00000616757 1315 ntTSL 5 BASIC25.67■■□□□ 1.7
RTFDC1Q9BY42 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC25.67■■□□□ 1.7
RTFDC1Q9BY42 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC25.67■■□□□ 1.7
RTFDC1Q9BY42 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC25.67■■□□□ 1.7
RTFDC1Q9BY42 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RTFDC1Q9BY42 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RTFDC1Q9BY42 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC25.67■■□□□ 1.7
RTFDC1Q9BY42 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RTFDC1Q9BY42 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC25.67■■□□□ 1.7
RTFDC1Q9BY42 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RTFDC1Q9BY42 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.67■■□□□ 1.7
RTFDC1Q9BY42 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RTFDC1Q9BY42 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RTFDC1Q9BY42 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
RTFDC1Q9BY42 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
RTFDC1Q9BY42 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC25.66■■□□□ 1.7
RTFDC1Q9BY42 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
RTFDC1Q9BY42 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.65■■□□□ 1.7
RTFDC1Q9BY42 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC25.65■■□□□ 1.7
RTFDC1Q9BY42 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC25.65■■□□□ 1.7
RTFDC1Q9BY42 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RTFDC1Q9BY42 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
RTFDC1Q9BY42 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
RTFDC1Q9BY42 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RTFDC1Q9BY42 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
RTFDC1Q9BY42 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RTFDC1Q9BY42 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC25.65■■□□□ 1.7
RTFDC1Q9BY42 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RTFDC1Q9BY42 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC25.65■■□□□ 1.7
RTFDC1Q9BY42 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RTFDC1Q9BY42 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RTFDC1Q9BY42 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC25.65■■□□□ 1.7
RTFDC1Q9BY42 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
RTFDC1Q9BY42 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
RTFDC1Q9BY42 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RTFDC1Q9BY42 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RTFDC1Q9BY42 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RTFDC1Q9BY42 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC25.64■■□□□ 1.7
RTFDC1Q9BY42 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
RTFDC1Q9BY42 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
RTFDC1Q9BY42 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.69
RTFDC1Q9BY42 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC25.64■■□□□ 1.69
RTFDC1Q9BY42 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
RTFDC1Q9BY42 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.69
RTFDC1Q9BY42 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC25.63■■□□□ 1.69
RTFDC1Q9BY42 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC25.63■■□□□ 1.69
RTFDC1Q9BY42 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
RTFDC1Q9BY42 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC25.63■■□□□ 1.69
RTFDC1Q9BY42 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC25.63■■□□□ 1.69
RTFDC1Q9BY42 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC25.63■■□□□ 1.69
RTFDC1Q9BY42 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RTFDC1Q9BY42 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RTFDC1Q9BY42 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
RTFDC1Q9BY42 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RTFDC1Q9BY42 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RTFDC1Q9BY42 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RTFDC1Q9BY42 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RTFDC1Q9BY42 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.62■■□□□ 1.69
RTFDC1Q9BY42 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RTFDC1Q9BY42 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC25.62■■□□□ 1.69
RTFDC1Q9BY42 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RTFDC1Q9BY42 CDV3P1-201ENST00000471403 739 ntBASIC25.62■■□□□ 1.69
RTFDC1Q9BY42 RNF121-214ENST00000533380 870 ntTSL 3 BASIC25.62■■□□□ 1.69
RTFDC1Q9BY42 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC25.62■■□□□ 1.69
RTFDC1Q9BY42 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RTFDC1Q9BY42 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
RTFDC1Q9BY42 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC25.62■■□□□ 1.69
RTFDC1Q9BY42 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
RTFDC1Q9BY42 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RTFDC1Q9BY42 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RTFDC1Q9BY42 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RTFDC1Q9BY42 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RTFDC1Q9BY42 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RTFDC1Q9BY42 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RTFDC1Q9BY42 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC25.61■■□□□ 1.69
RTFDC1Q9BY42 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC25.61■■□□□ 1.69
RTFDC1Q9BY42 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC25.61■■□□□ 1.69
RTFDC1Q9BY42 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
RTFDC1Q9BY42 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC25.61■■□□□ 1.69
RTFDC1Q9BY42 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
RTFDC1Q9BY42 AL589743.5-201ENST00000616611 1050 ntBASIC25.61■■□□□ 1.69
RTFDC1Q9BY42 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC25.61■■□□□ 1.69
RTFDC1Q9BY42 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC25.61■■□□□ 1.69
RTFDC1Q9BY42 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC25.61■■□□□ 1.69
RTFDC1Q9BY42 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RTFDC1Q9BY42 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
RTFDC1Q9BY42 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC25.61■■□□□ 1.69
RTFDC1Q9BY42 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms