Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 AC055733.4-201ENST00000638462 1354 ntBASIC19.71■□□□□ 0.75
CPPED1Q9BRF8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
CPPED1Q9BRF8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CPPED1Q9BRF8 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPPED1Q9BRF8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPPED1Q9BRF8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.71■□□□□ 0.75
CPPED1Q9BRF8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.71■□□□□ 0.75
CPPED1Q9BRF8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.71■□□□□ 0.75
CPPED1Q9BRF8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CPPED1Q9BRF8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPPED1Q9BRF8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.71■□□□□ 0.75
CPPED1Q9BRF8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.71■□□□□ 0.75
CPPED1Q9BRF8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CPPED1Q9BRF8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPPED1Q9BRF8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPPED1Q9BRF8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CPPED1Q9BRF8 AC121338.2-201ENST00000622535 1744 ntBASIC19.71■□□□□ 0.75
CPPED1Q9BRF8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CPPED1Q9BRF8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.7■□□□□ 0.74
CPPED1Q9BRF8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPPED1Q9BRF8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPPED1Q9BRF8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.7■□□□□ 0.74
CPPED1Q9BRF8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.7■□□□□ 0.74
CPPED1Q9BRF8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.7■□□□□ 0.74
CPPED1Q9BRF8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.7■□□□□ 0.74
CPPED1Q9BRF8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPPED1Q9BRF8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPPED1Q9BRF8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CPPED1Q9BRF8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPPED1Q9BRF8 AC009237.3-201ENST00000393279 1427 ntBASIC19.69■□□□□ 0.74
CPPED1Q9BRF8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPPED1Q9BRF8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPPED1Q9BRF8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPPED1Q9BRF8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CPPED1Q9BRF8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.69■□□□□ 0.74
CPPED1Q9BRF8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.69■□□□□ 0.74
CPPED1Q9BRF8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.69■□□□□ 0.74
CPPED1Q9BRF8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.69■□□□□ 0.74
CPPED1Q9BRF8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPPED1Q9BRF8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPPED1Q9BRF8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CPPED1Q9BRF8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPPED1Q9BRF8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPPED1Q9BRF8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
CPPED1Q9BRF8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPPED1Q9BRF8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPPED1Q9BRF8 IGHV3-19-201ENST00000521488 291 ntBASIC19.68■□□□□ 0.74
CPPED1Q9BRF8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPPED1Q9BRF8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPPED1Q9BRF8 AC233992.3-201ENST00000607491 485 ntBASIC19.68■□□□□ 0.74
CPPED1Q9BRF8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.68■□□□□ 0.74
CPPED1Q9BRF8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPPED1Q9BRF8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPPED1Q9BRF8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPPED1Q9BRF8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPPED1Q9BRF8 AC027702.1-201ENST00000563810 1770 ntBASIC19.67■□□□□ 0.74
CPPED1Q9BRF8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPPED1Q9BRF8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.67■□□□□ 0.74
CPPED1Q9BRF8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CPPED1Q9BRF8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CPPED1Q9BRF8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CPPED1Q9BRF8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPPED1Q9BRF8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPPED1Q9BRF8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.67■□□□□ 0.74
CPPED1Q9BRF8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPPED1Q9BRF8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPPED1Q9BRF8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPPED1Q9BRF8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CPPED1Q9BRF8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.67■□□□□ 0.74
CPPED1Q9BRF8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPPED1Q9BRF8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CPPED1Q9BRF8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPPED1Q9BRF8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
CPPED1Q9BRF8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPPED1Q9BRF8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CPPED1Q9BRF8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.66■□□□□ 0.74
CPPED1Q9BRF8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPPED1Q9BRF8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPPED1Q9BRF8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.66■□□□□ 0.74
CPPED1Q9BRF8 AL136116.3-201ENST00000402907 1138 ntBASIC19.66■□□□□ 0.74
CPPED1Q9BRF8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.66■□□□□ 0.74
CPPED1Q9BRF8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPPED1Q9BRF8 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPPED1Q9BRF8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CPPED1Q9BRF8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPPED1Q9BRF8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.66■□□□□ 0.74
CPPED1Q9BRF8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CPPED1Q9BRF8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPPED1Q9BRF8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CPPED1Q9BRF8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPPED1Q9BRF8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CPPED1Q9BRF8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CPPED1Q9BRF8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPPED1Q9BRF8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CPPED1Q9BRF8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CPPED1Q9BRF8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPPED1Q9BRF8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPPED1Q9BRF8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.65■□□□□ 0.74
CPPED1Q9BRF8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPPED1Q9BRF8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms