Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
TWNKQ96RR1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.32■■□□□ 1.16
TWNKQ96RR1 AL024507.2-201ENST00000606070 2574 ntBASIC22.32■■□□□ 1.16
TWNKQ96RR1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
TWNKQ96RR1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
TWNKQ96RR1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TWNKQ96RR1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.32■■□□□ 1.16
TWNKQ96RR1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.32■■□□□ 1.16
TWNKQ96RR1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.32■■□□□ 1.16
TWNKQ96RR1 MFSD11-216ENST00000590393 1141 ntBASIC22.32■■□□□ 1.16
TWNKQ96RR1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TWNKQ96RR1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TWNKQ96RR1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.32■■□□□ 1.16
TWNKQ96RR1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TWNKQ96RR1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TWNKQ96RR1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
TWNKQ96RR1 KRT16P2-201ENST00000414673 1423 ntBASIC22.31■■□□□ 1.16
TWNKQ96RR1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
TWNKQ96RR1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TWNKQ96RR1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TWNKQ96RR1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TWNKQ96RR1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TWNKQ96RR1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
TWNKQ96RR1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TWNKQ96RR1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
TWNKQ96RR1 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.31■■□□□ 1.16
TWNKQ96RR1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.31■■□□□ 1.16
TWNKQ96RR1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TWNKQ96RR1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TWNKQ96RR1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.31■■□□□ 1.16
TWNKQ96RR1 AF106564.1-201ENST00000607058 2553 ntBASIC22.31■■□□□ 1.16
TWNKQ96RR1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TWNKQ96RR1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TWNKQ96RR1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
TWNKQ96RR1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.3■■□□□ 1.16
TWNKQ96RR1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.3■■□□□ 1.16
TWNKQ96RR1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.3■■□□□ 1.16
TWNKQ96RR1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.3■■□□□ 1.16
TWNKQ96RR1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TWNKQ96RR1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
TWNKQ96RR1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TWNKQ96RR1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TWNKQ96RR1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
TWNKQ96RR1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
TWNKQ96RR1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TWNKQ96RR1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.3■■□□□ 1.16
TWNKQ96RR1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TWNKQ96RR1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TWNKQ96RR1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
TWNKQ96RR1 FEM1AP4-201ENST00000443167 1987 ntBASIC22.29■■□□□ 1.16
TWNKQ96RR1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.29■■□□□ 1.16
TWNKQ96RR1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.29■■□□□ 1.16
TWNKQ96RR1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.29■■□□□ 1.16
TWNKQ96RR1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
TWNKQ96RR1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.29■■□□□ 1.16
TWNKQ96RR1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TWNKQ96RR1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
TWNKQ96RR1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TWNKQ96RR1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TWNKQ96RR1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TWNKQ96RR1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
TWNKQ96RR1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
TWNKQ96RR1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TWNKQ96RR1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TWNKQ96RR1 KRT18P11-201ENST00000435214 1283 ntBASIC22.28■■□□□ 1.16
TWNKQ96RR1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.28■■□□□ 1.16
TWNKQ96RR1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TWNKQ96RR1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
TWNKQ96RR1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.28■■□□□ 1.16
TWNKQ96RR1 SLC7A5P1-201ENST00000568957 537 ntBASIC22.28■■□□□ 1.16
TWNKQ96RR1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
TWNKQ96RR1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TWNKQ96RR1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.28■■□□□ 1.16
TWNKQ96RR1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TWNKQ96RR1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
TWNKQ96RR1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.28■■□□□ 1.16
TWNKQ96RR1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.28■■□□□ 1.16
TWNKQ96RR1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TWNKQ96RR1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TWNKQ96RR1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.27■■□□□ 1.16
TWNKQ96RR1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.27■■□□□ 1.16
TWNKQ96RR1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.27■■□□□ 1.16
TWNKQ96RR1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TWNKQ96RR1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.27■■□□□ 1.16
TWNKQ96RR1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
TWNKQ96RR1 BID-214ENST00000617586 542 ntTSL 5 BASIC22.27■■□□□ 1.16
TWNKQ96RR1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.27■■□□□ 1.16
TWNKQ96RR1 AC120498.10-201ENST00000621827 505 ntBASIC22.27■■□□□ 1.16
TWNKQ96RR1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
TWNKQ96RR1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
TWNKQ96RR1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
TWNKQ96RR1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TWNKQ96RR1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TWNKQ96RR1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
TWNKQ96RR1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TWNKQ96RR1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.26■■□□□ 1.15
TWNKQ96RR1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TWNKQ96RR1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
TWNKQ96RR1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TWNKQ96RR1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms