Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
CSMD1Q96PZ7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CSMD1Q96PZ7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSMD1Q96PZ7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSMD1Q96PZ7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.98■□□□□ 0.47
CSMD1Q96PZ7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
CSMD1Q96PZ7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSMD1Q96PZ7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.98■□□□□ 0.47
CSMD1Q96PZ7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CSMD1Q96PZ7 AC093323.1-202ENST00000635031 2045 ntBASIC17.98■□□□□ 0.47
CSMD1Q96PZ7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.98■□□□□ 0.47
CSMD1Q96PZ7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CSMD1Q96PZ7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CSMD1Q96PZ7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CSMD1Q96PZ7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CSMD1Q96PZ7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.97■□□□□ 0.47
CSMD1Q96PZ7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CSMD1Q96PZ7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.97■□□□□ 0.47
CSMD1Q96PZ7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CSMD1Q96PZ7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.97■□□□□ 0.47
CSMD1Q96PZ7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CSMD1Q96PZ7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.97■□□□□ 0.47
CSMD1Q96PZ7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.97■□□□□ 0.47
CSMD1Q96PZ7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CSMD1Q96PZ7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CSMD1Q96PZ7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CSMD1Q96PZ7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CSMD1Q96PZ7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.96■□□□□ 0.47
CSMD1Q96PZ7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.96■□□□□ 0.47
CSMD1Q96PZ7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.96■□□□□ 0.47
CSMD1Q96PZ7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSMD1Q96PZ7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSMD1Q96PZ7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CSMD1Q96PZ7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.96■□□□□ 0.47
CSMD1Q96PZ7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.96■□□□□ 0.47
CSMD1Q96PZ7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.96■□□□□ 0.47
CSMD1Q96PZ7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.96■□□□□ 0.47
CSMD1Q96PZ7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.96■□□□□ 0.47
CSMD1Q96PZ7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSMD1Q96PZ7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CSMD1Q96PZ7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSMD1Q96PZ7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSMD1Q96PZ7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSMD1Q96PZ7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSMD1Q96PZ7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CSMD1Q96PZ7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSMD1Q96PZ7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CSMD1Q96PZ7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.95■□□□□ 0.46
CSMD1Q96PZ7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSMD1Q96PZ7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CSMD1Q96PZ7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CSMD1Q96PZ7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSMD1Q96PZ7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CSMD1Q96PZ7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CSMD1Q96PZ7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSMD1Q96PZ7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSMD1Q96PZ7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSMD1Q96PZ7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.95■□□□□ 0.46
CSMD1Q96PZ7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSMD1Q96PZ7 AL049597.2-201ENST00000565575 961 ntBASIC17.95■□□□□ 0.46
CSMD1Q96PZ7 AC060766.5-201ENST00000590539 871 ntBASIC17.95■□□□□ 0.46
CSMD1Q96PZ7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSMD1Q96PZ7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSMD1Q96PZ7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CSMD1Q96PZ7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSMD1Q96PZ7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.94■□□□□ 0.46
CSMD1Q96PZ7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.94■□□□□ 0.46
CSMD1Q96PZ7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CSMD1Q96PZ7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSMD1Q96PZ7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSMD1Q96PZ7 PRKY-204ENST00000533551 1019 ntBASIC17.94■□□□□ 0.46
CSMD1Q96PZ7 AL590326.2-201ENST00000625139 305 ntBASIC17.94■□□□□ 0.46
CSMD1Q96PZ7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.94■□□□□ 0.46
CSMD1Q96PZ7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSMD1Q96PZ7 KRT17P2-201ENST00000300992 1314 ntBASIC17.94■□□□□ 0.46
CSMD1Q96PZ7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.94■□□□□ 0.46
CSMD1Q96PZ7 AL139125.2-201ENST00000623134 1869 ntBASIC17.94■□□□□ 0.46
CSMD1Q96PZ7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.94■□□□□ 0.46
CSMD1Q96PZ7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.94■□□□□ 0.46
CSMD1Q96PZ7 AL355472.2-201ENST00000422958 438 ntBASIC17.94■□□□□ 0.46
CSMD1Q96PZ7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSMD1Q96PZ7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.94■□□□□ 0.46
CSMD1Q96PZ7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CSMD1Q96PZ7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.94■□□□□ 0.46
CSMD1Q96PZ7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CSMD1Q96PZ7 AP003733.4-201ENST00000623785 1697 ntBASIC17.93■□□□□ 0.46
CSMD1Q96PZ7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.93■□□□□ 0.46
CSMD1Q96PZ7 AP006587.3-201ENST00000525742 1516 ntBASIC17.93■□□□□ 0.46
CSMD1Q96PZ7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSMD1Q96PZ7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CSMD1Q96PZ7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.93■□□□□ 0.46
CSMD1Q96PZ7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSMD1Q96PZ7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSMD1Q96PZ7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSMD1Q96PZ7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSMD1Q96PZ7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CSMD1Q96PZ7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.93■□□□□ 0.46
CSMD1Q96PZ7 MIR6786-201ENST00000616843 113 ntBASIC17.93■□□□□ 0.46
CSMD1Q96PZ7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSMD1Q96PZ7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms