Protein–RNA interactions for Protein: Q96LM1

LINC00615, Putative uncharacterized protein encoded by LINC00615, humanhuman

Predicted RBP Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00615Q96LM1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00615Q96LM1 RBM17P2-201ENST00000616397 1405 ntBASIC20.53■□□□□ 0.88
LINC00615Q96LM1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
LINC00615Q96LM1 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.52■□□□□ 0.88
LINC00615Q96LM1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
LINC00615Q96LM1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00615Q96LM1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00615Q96LM1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
LINC00615Q96LM1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.52■□□□□ 0.88
LINC00615Q96LM1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00615Q96LM1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00615Q96LM1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINC00615Q96LM1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.52■□□□□ 0.88
LINC00615Q96LM1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.52■□□□□ 0.88
LINC00615Q96LM1 DUX4L16-201ENST00000555130 1264 ntBASIC20.52■□□□□ 0.88
LINC00615Q96LM1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
LINC00615Q96LM1 AC080038.1-201ENST00000611274 1154 ntBASIC20.52■□□□□ 0.88
LINC00615Q96LM1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
LINC00615Q96LM1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
LINC00615Q96LM1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.87
LINC00615Q96LM1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LINC00615Q96LM1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00615Q96LM1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.51■□□□□ 0.87
LINC00615Q96LM1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00615Q96LM1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00615Q96LM1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.51■□□□□ 0.87
LINC00615Q96LM1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00615Q96LM1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.51■□□□□ 0.87
LINC00615Q96LM1 TERF1P5-201ENST00000477545 1207 ntBASIC20.51■□□□□ 0.87
LINC00615Q96LM1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
LINC00615Q96LM1 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.51■□□□□ 0.87
LINC00615Q96LM1 RARRES2P11-201ENST00000635158 484 ntBASIC20.51■□□□□ 0.87
LINC00615Q96LM1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00615Q96LM1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.51■□□□□ 0.87
LINC00615Q96LM1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00615Q96LM1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00615Q96LM1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.5■□□□□ 0.87
LINC00615Q96LM1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.5■□□□□ 0.87
LINC00615Q96LM1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00615Q96LM1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00615Q96LM1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
LINC00615Q96LM1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
LINC00615Q96LM1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.5■□□□□ 0.87
LINC00615Q96LM1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00615Q96LM1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.5■□□□□ 0.87
LINC00615Q96LM1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00615Q96LM1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.5■□□□□ 0.87
LINC00615Q96LM1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.5■□□□□ 0.87
LINC00615Q96LM1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00615Q96LM1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00615Q96LM1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.5■□□□□ 0.87
LINC00615Q96LM1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.49■□□□□ 0.87
LINC00615Q96LM1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC00615Q96LM1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC00615Q96LM1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.49■□□□□ 0.87
LINC00615Q96LM1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC00615Q96LM1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.49■□□□□ 0.87
LINC00615Q96LM1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.49■□□□□ 0.87
LINC00615Q96LM1 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.49■□□□□ 0.87
LINC00615Q96LM1 AC245052.3-201ENST00000450182 901 ntBASIC20.49■□□□□ 0.87
LINC00615Q96LM1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.49■□□□□ 0.87
LINC00615Q96LM1 AC007322.4-201ENST00000509611 723 ntBASIC20.49■□□□□ 0.87
LINC00615Q96LM1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.49■□□□□ 0.87
LINC00615Q96LM1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
LINC00615Q96LM1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
LINC00615Q96LM1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC00615Q96LM1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.49■□□□□ 0.87
LINC00615Q96LM1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC00615Q96LM1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC00615Q96LM1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC00615Q96LM1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC00615Q96LM1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINC00615Q96LM1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINC00615Q96LM1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINC00615Q96LM1 CDCA4P2-201ENST00000441182 718 ntBASIC20.48■□□□□ 0.87
LINC00615Q96LM1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.48■□□□□ 0.87
LINC00615Q96LM1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LINC00615Q96LM1 RAP2CP1-201ENST00000605103 478 ntBASIC20.48■□□□□ 0.87
LINC00615Q96LM1 AC231657.2-201ENST00000624556 255 ntBASIC20.48■□□□□ 0.87
LINC00615Q96LM1 AC013268.1-206ENST00000638368 961 ntBASIC20.48■□□□□ 0.87
LINC00615Q96LM1 AC112229.1-201ENST00000639295 961 ntBASIC20.48■□□□□ 0.87
LINC00615Q96LM1 AC073111.5-205ENST00000641717 521 ntBASIC20.48■□□□□ 0.87
LINC00615Q96LM1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LINC00615Q96LM1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LINC00615Q96LM1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
LINC00615Q96LM1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.48■□□□□ 0.87
LINC00615Q96LM1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LINC00615Q96LM1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00615Q96LM1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
LINC00615Q96LM1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00615Q96LM1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00615Q96LM1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00615Q96LM1 CNN2P6-201ENST00000439038 900 ntBASIC20.47■□□□□ 0.87
LINC00615Q96LM1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.47■□□□□ 0.87
LINC00615Q96LM1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00615Q96LM1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.47■□□□□ 0.87
LINC00615Q96LM1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
LINC00615Q96LM1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00615Q96LM1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.47■□□□□ 0.87
LINC00615Q96LM1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms