Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.98■□□□□ 0.79
VMP1Q96GC9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.98■□□□□ 0.79
VMP1Q96GC9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VMP1Q96GC9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.98■□□□□ 0.79
VMP1Q96GC9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.98■□□□□ 0.79
VMP1Q96GC9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VMP1Q96GC9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VMP1Q96GC9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.98■□□□□ 0.79
VMP1Q96GC9 AC104564.3-201ENST00000582367 638 ntBASIC19.98■□□□□ 0.79
VMP1Q96GC9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VMP1Q96GC9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VMP1Q96GC9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VMP1Q96GC9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.98■□□□□ 0.79
VMP1Q96GC9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VMP1Q96GC9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.98■□□□□ 0.79
VMP1Q96GC9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
VMP1Q96GC9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VMP1Q96GC9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.97■□□□□ 0.79
VMP1Q96GC9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VMP1Q96GC9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VMP1Q96GC9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
VMP1Q96GC9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
VMP1Q96GC9 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VMP1Q96GC9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VMP1Q96GC9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.97■□□□□ 0.79
VMP1Q96GC9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
VMP1Q96GC9 KRT18P5-201ENST00000436075 1291 ntBASIC19.97■□□□□ 0.79
VMP1Q96GC9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VMP1Q96GC9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VMP1Q96GC9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.97■□□□□ 0.79
VMP1Q96GC9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.97■□□□□ 0.79
VMP1Q96GC9 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VMP1Q96GC9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VMP1Q96GC9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VMP1Q96GC9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
VMP1Q96GC9 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.97■□□□□ 0.79
VMP1Q96GC9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
VMP1Q96GC9 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VMP1Q96GC9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VMP1Q96GC9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VMP1Q96GC9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VMP1Q96GC9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VMP1Q96GC9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
VMP1Q96GC9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.96■□□□□ 0.79
VMP1Q96GC9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.96■□□□□ 0.79
VMP1Q96GC9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
VMP1Q96GC9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VMP1Q96GC9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.96■□□□□ 0.79
VMP1Q96GC9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.96■□□□□ 0.79
VMP1Q96GC9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VMP1Q96GC9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VMP1Q96GC9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.95■□□□□ 0.78
VMP1Q96GC9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VMP1Q96GC9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
VMP1Q96GC9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
VMP1Q96GC9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
VMP1Q96GC9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VMP1Q96GC9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VMP1Q96GC9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
VMP1Q96GC9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
VMP1Q96GC9 AC079140.4-201ENST00000507448 529 ntBASIC19.95■□□□□ 0.78
VMP1Q96GC9 NTF6G-201ENST00000591094 616 ntBASIC19.95■□□□□ 0.78
VMP1Q96GC9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.95■□□□□ 0.78
VMP1Q96GC9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.95■□□□□ 0.78
VMP1Q96GC9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VMP1Q96GC9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VMP1Q96GC9 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VMP1Q96GC9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VMP1Q96GC9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
VMP1Q96GC9 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
VMP1Q96GC9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VMP1Q96GC9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.94■□□□□ 0.78
VMP1Q96GC9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VMP1Q96GC9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VMP1Q96GC9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VMP1Q96GC9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.94■□□□□ 0.78
VMP1Q96GC9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
VMP1Q96GC9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.94■□□□□ 0.78
VMP1Q96GC9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VMP1Q96GC9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
VMP1Q96GC9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VMP1Q96GC9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VMP1Q96GC9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VMP1Q96GC9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VMP1Q96GC9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.93■□□□□ 0.78
VMP1Q96GC9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VMP1Q96GC9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VMP1Q96GC9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VMP1Q96GC9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VMP1Q96GC9 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VMP1Q96GC9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.93■□□□□ 0.78
VMP1Q96GC9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.93■□□□□ 0.78
VMP1Q96GC9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.93■□□□□ 0.78
VMP1Q96GC9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.93■□□□□ 0.78
VMP1Q96GC9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.93■□□□□ 0.78
VMP1Q96GC9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VMP1Q96GC9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VMP1Q96GC9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
VMP1Q96GC9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
VMP1Q96GC9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms