Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF31Q96EP0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RNF31Q96EP0 ABHD17AP1-201ENST00000358206 933 ntBASIC20.16■□□□□ 0.82
RNF31Q96EP0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RNF31Q96EP0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.16■□□□□ 0.82
RNF31Q96EP0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF31Q96EP0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF31Q96EP0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF31Q96EP0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF31Q96EP0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
RNF31Q96EP0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF31Q96EP0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF31Q96EP0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RNF31Q96EP0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RNF31Q96EP0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF31Q96EP0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF31Q96EP0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF31Q96EP0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
RNF31Q96EP0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
RNF31Q96EP0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF31Q96EP0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF31Q96EP0 TSPY20P-201ENST00000450910 630 ntBASIC20.15■□□□□ 0.82
RNF31Q96EP0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF31Q96EP0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF31Q96EP0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF31Q96EP0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF31Q96EP0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF31Q96EP0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.15■□□□□ 0.82
RNF31Q96EP0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.15■□□□□ 0.82
RNF31Q96EP0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.15■□□□□ 0.82
RNF31Q96EP0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF31Q96EP0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF31Q96EP0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF31Q96EP0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF31Q96EP0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RNF31Q96EP0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.14■□□□□ 0.82
RNF31Q96EP0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF31Q96EP0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF31Q96EP0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF31Q96EP0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF31Q96EP0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF31Q96EP0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF31Q96EP0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
RNF31Q96EP0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
RNF31Q96EP0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF31Q96EP0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.14■□□□□ 0.81
RNF31Q96EP0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.14■□□□□ 0.81
RNF31Q96EP0 EEF1DP3-203ENST00000566025 782 ntBASIC20.14■□□□□ 0.81
RNF31Q96EP0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF31Q96EP0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
RNF31Q96EP0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF31Q96EP0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF31Q96EP0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF31Q96EP0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF31Q96EP0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF31Q96EP0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF31Q96EP0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF31Q96EP0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF31Q96EP0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF31Q96EP0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF31Q96EP0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF31Q96EP0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF31Q96EP0 AL034346.1-201ENST00000568244 1277 ntBASIC20.13■□□□□ 0.81
RNF31Q96EP0 MIR4651-201ENST00000582622 73 ntBASIC20.13■□□□□ 0.81
RNF31Q96EP0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF31Q96EP0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF31Q96EP0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF31Q96EP0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF31Q96EP0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
RNF31Q96EP0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF31Q96EP0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF31Q96EP0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF31Q96EP0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF31Q96EP0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RNF31Q96EP0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF31Q96EP0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF31Q96EP0 SLC29A4P1-201ENST00000398760 971 ntBASIC20.12■□□□□ 0.81
RNF31Q96EP0 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.12■□□□□ 0.81
RNF31Q96EP0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF31Q96EP0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF31Q96EP0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF31Q96EP0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.12■□□□□ 0.81
RNF31Q96EP0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF31Q96EP0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF31Q96EP0 AC061975.6-201ENST00000579045 1553 ntBASIC20.12■□□□□ 0.81
RNF31Q96EP0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF31Q96EP0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RNF31Q96EP0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF31Q96EP0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF31Q96EP0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF31Q96EP0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF31Q96EP0 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.11■□□□□ 0.81
RNF31Q96EP0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF31Q96EP0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF31Q96EP0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF31Q96EP0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RNF31Q96EP0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF31Q96EP0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF31Q96EP0 CD99P1-205ENST00000527459 561 ntBASIC20.11■□□□□ 0.81
RNF31Q96EP0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms