Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.06■□□□□ 0.96
ECHDC3Q96DC8 TERF1P5-201ENST00000477545 1207 ntBASIC21.06■□□□□ 0.96
ECHDC3Q96DC8 AC090192.1-201ENST00000517740 490 ntBASIC21.06■□□□□ 0.96
ECHDC3Q96DC8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.06■□□□□ 0.96
ECHDC3Q96DC8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.06■□□□□ 0.96
ECHDC3Q96DC8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ECHDC3Q96DC8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
ECHDC3Q96DC8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ECHDC3Q96DC8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ECHDC3Q96DC8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ECHDC3Q96DC8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ECHDC3Q96DC8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ECHDC3Q96DC8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
ECHDC3Q96DC8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.05■□□□□ 0.96
ECHDC3Q96DC8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ECHDC3Q96DC8 AC026185.1-201ENST00000445748 174 ntBASIC21.05■□□□□ 0.96
ECHDC3Q96DC8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.05■□□□□ 0.96
ECHDC3Q96DC8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
ECHDC3Q96DC8 AC231657.2-201ENST00000624556 255 ntBASIC21.05■□□□□ 0.96
ECHDC3Q96DC8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ECHDC3Q96DC8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ECHDC3Q96DC8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.05■□□□□ 0.96
ECHDC3Q96DC8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ECHDC3Q96DC8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.05■□□□□ 0.96
ECHDC3Q96DC8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ECHDC3Q96DC8 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ECHDC3Q96DC8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.04■□□□□ 0.96
ECHDC3Q96DC8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ECHDC3Q96DC8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.04■□□□□ 0.96
ECHDC3Q96DC8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.04■□□□□ 0.96
ECHDC3Q96DC8 AC013268.1-206ENST00000638368 961 ntBASIC21.04■□□□□ 0.96
ECHDC3Q96DC8 AC112229.1-201ENST00000639295 961 ntBASIC21.04■□□□□ 0.96
ECHDC3Q96DC8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ECHDC3Q96DC8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ECHDC3Q96DC8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.04■□□□□ 0.96
ECHDC3Q96DC8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
ECHDC3Q96DC8 LINC00565-201ENST00000562710 2331 ntBASIC21.04■□□□□ 0.96
ECHDC3Q96DC8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.04■□□□□ 0.96
ECHDC3Q96DC8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ECHDC3Q96DC8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.03■□□□□ 0.96
ECHDC3Q96DC8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.03■□□□□ 0.96
ECHDC3Q96DC8 AC007322.4-201ENST00000509611 723 ntBASIC21.03■□□□□ 0.96
ECHDC3Q96DC8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ECHDC3Q96DC8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.03■□□□□ 0.96
ECHDC3Q96DC8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
ECHDC3Q96DC8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ECHDC3Q96DC8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ECHDC3Q96DC8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ECHDC3Q96DC8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ECHDC3Q96DC8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ECHDC3Q96DC8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
ECHDC3Q96DC8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
ECHDC3Q96DC8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ECHDC3Q96DC8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
ECHDC3Q96DC8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.02■□□□□ 0.96
ECHDC3Q96DC8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
ECHDC3Q96DC8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.02■□□□□ 0.96
ECHDC3Q96DC8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
ECHDC3Q96DC8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.02■□□□□ 0.96
ECHDC3Q96DC8 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.02■□□□□ 0.96
ECHDC3Q96DC8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
ECHDC3Q96DC8 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
ECHDC3Q96DC8 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
ECHDC3Q96DC8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ECHDC3Q96DC8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.01■□□□□ 0.95
ECHDC3Q96DC8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ECHDC3Q96DC8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ECHDC3Q96DC8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ECHDC3Q96DC8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ECHDC3Q96DC8 Z98882.1-201ENST00000622160 2253 ntBASIC21.01■□□□□ 0.95
ECHDC3Q96DC8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ECHDC3Q96DC8 CROCCP5-201ENST00000436658 830 ntBASIC21.01■□□□□ 0.95
ECHDC3Q96DC8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.01■□□□□ 0.95
ECHDC3Q96DC8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ECHDC3Q96DC8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.01■□□□□ 0.95
ECHDC3Q96DC8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
ECHDC3Q96DC8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ECHDC3Q96DC8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ECHDC3Q96DC8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.01■□□□□ 0.95
ECHDC3Q96DC8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.01■□□□□ 0.95
ECHDC3Q96DC8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21■□□□□ 0.95
ECHDC3Q96DC8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21■□□□□ 0.95
ECHDC3Q96DC8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21■□□□□ 0.95
ECHDC3Q96DC8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ECHDC3Q96DC8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21■□□□□ 0.95
ECHDC3Q96DC8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21■□□□□ 0.95
ECHDC3Q96DC8 AC007322.1-201ENST00000426983 750 ntBASIC21■□□□□ 0.95
ECHDC3Q96DC8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21■□□□□ 0.95
ECHDC3Q96DC8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21■□□□□ 0.95
ECHDC3Q96DC8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21■□□□□ 0.95
ECHDC3Q96DC8 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21■□□□□ 0.95
ECHDC3Q96DC8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21■□□□□ 0.95
ECHDC3Q96DC8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21■□□□□ 0.95
ECHDC3Q96DC8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21■□□□□ 0.95
ECHDC3Q96DC8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ECHDC3Q96DC8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ECHDC3Q96DC8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ECHDC3Q96DC8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
ECHDC3Q96DC8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21■□□□□ 0.95
ECHDC3Q96DC8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms