Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.15■□□□□ 0.82
UBE2E3Q969T4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBE2E3Q969T4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBE2E3Q969T4 AL049796.1-201ENST00000565336 1766 ntBASIC20.15■□□□□ 0.82
UBE2E3Q969T4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
UBE2E3Q969T4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBE2E3Q969T4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
UBE2E3Q969T4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBE2E3Q969T4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBE2E3Q969T4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBE2E3Q969T4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBE2E3Q969T4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBE2E3Q969T4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.14■□□□□ 0.81
UBE2E3Q969T4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
UBE2E3Q969T4 AP004607.4-201ENST00000530158 1459 ntBASIC20.14■□□□□ 0.81
UBE2E3Q969T4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBE2E3Q969T4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
UBE2E3Q969T4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.14■□□□□ 0.81
UBE2E3Q969T4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.14■□□□□ 0.81
UBE2E3Q969T4 AC138907.5-202ENST00000569484 235 ntBASIC20.14■□□□□ 0.81
UBE2E3Q969T4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.14■□□□□ 0.81
UBE2E3Q969T4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
UBE2E3Q969T4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.14■□□□□ 0.81
UBE2E3Q969T4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
UBE2E3Q969T4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBE2E3Q969T4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.13■□□□□ 0.81
UBE2E3Q969T4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.13■□□□□ 0.81
UBE2E3Q969T4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.13■□□□□ 0.81
UBE2E3Q969T4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBE2E3Q969T4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBE2E3Q969T4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBE2E3Q969T4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.13■□□□□ 0.81
UBE2E3Q969T4 CCDC92B-201ENST00000575506 885 ntBASIC20.13■□□□□ 0.81
UBE2E3Q969T4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBE2E3Q969T4 AC120498.10-201ENST00000621827 505 ntBASIC20.13■□□□□ 0.81
UBE2E3Q969T4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
UBE2E3Q969T4 AL137060.1-201ENST00000618151 2648 ntBASIC20.13■□□□□ 0.81
UBE2E3Q969T4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBE2E3Q969T4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
UBE2E3Q969T4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBE2E3Q969T4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBE2E3Q969T4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.12■□□□□ 0.81
UBE2E3Q969T4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
UBE2E3Q969T4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UBE2E3Q969T4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
UBE2E3Q969T4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.12■□□□□ 0.81
UBE2E3Q969T4 KRT18P14-201ENST00000534205 1250 ntBASIC20.12■□□□□ 0.81
UBE2E3Q969T4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UBE2E3Q969T4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
UBE2E3Q969T4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.12■□□□□ 0.81
UBE2E3Q969T4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
UBE2E3Q969T4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.11■□□□□ 0.81
UBE2E3Q969T4 AC005229.4-201ENST00000610085 2198 ntBASIC20.11■□□□□ 0.81
UBE2E3Q969T4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBE2E3Q969T4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBE2E3Q969T4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.11■□□□□ 0.81
UBE2E3Q969T4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBE2E3Q969T4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBE2E3Q969T4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBE2E3Q969T4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.11■□□□□ 0.81
UBE2E3Q969T4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBE2E3Q969T4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.11■□□□□ 0.81
UBE2E3Q969T4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBE2E3Q969T4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.11■□□□□ 0.81
UBE2E3Q969T4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.11■□□□□ 0.81
UBE2E3Q969T4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.11■□□□□ 0.81
UBE2E3Q969T4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBE2E3Q969T4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBE2E3Q969T4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.11■□□□□ 0.81
UBE2E3Q969T4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBE2E3Q969T4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
UBE2E3Q969T4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
UBE2E3Q969T4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBE2E3Q969T4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.1■□□□□ 0.81
UBE2E3Q969T4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.1■□□□□ 0.81
UBE2E3Q969T4 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.1■□□□□ 0.81
UBE2E3Q969T4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.1■□□□□ 0.81
UBE2E3Q969T4 DUX4L2-201ENST00000561772 1275 ntBASIC20.1■□□□□ 0.81
UBE2E3Q969T4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
UBE2E3Q969T4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.1■□□□□ 0.81
UBE2E3Q969T4 DUX4L6-201ENST00000626483 1275 ntBASIC20.1■□□□□ 0.81
UBE2E3Q969T4 DUX4L1-201ENST00000627662 1275 ntBASIC20.1■□□□□ 0.81
UBE2E3Q969T4 DUX4L8-201ENST00000629013 1275 ntBASIC20.1■□□□□ 0.81
UBE2E3Q969T4 DUX4L3-201ENST00000630187 1275 ntBASIC20.1■□□□□ 0.81
UBE2E3Q969T4 DUX4L7-201ENST00000630678 1275 ntBASIC20.1■□□□□ 0.81
UBE2E3Q969T4 DUX4L5-201ENST00000630834 1275 ntBASIC20.1■□□□□ 0.81
UBE2E3Q969T4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
UBE2E3Q969T4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.1■□□□□ 0.81
UBE2E3Q969T4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.1■□□□□ 0.81
UBE2E3Q969T4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBE2E3Q969T4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.1■□□□□ 0.81
UBE2E3Q969T4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBE2E3Q969T4 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.09■□□□□ 0.81
UBE2E3Q969T4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.09■□□□□ 0.81
UBE2E3Q969T4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.09■□□□□ 0.81
UBE2E3Q969T4 AC010141.2-201ENST00000452426 721 ntBASIC20.09■□□□□ 0.81
UBE2E3Q969T4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBE2E3Q969T4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBE2E3Q969T4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBE2E3Q969T4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms