Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.18■□□□□ 0.66
TRUB1Q8WWH5 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRUB1Q8WWH5 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.17■□□□□ 0.66
TRUB1Q8WWH5 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRUB1Q8WWH5 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRUB1Q8WWH5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRUB1Q8WWH5 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TRUB1Q8WWH5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRUB1Q8WWH5 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRUB1Q8WWH5 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.17■□□□□ 0.66
TRUB1Q8WWH5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.17■□□□□ 0.66
TRUB1Q8WWH5 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TRUB1Q8WWH5 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.17■□□□□ 0.66
TRUB1Q8WWH5 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.17■□□□□ 0.66
TRUB1Q8WWH5 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRUB1Q8WWH5 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRUB1Q8WWH5 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRUB1Q8WWH5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRUB1Q8WWH5 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TRUB1Q8WWH5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TRUB1Q8WWH5 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRUB1Q8WWH5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRUB1Q8WWH5 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TRUB1Q8WWH5 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.17■□□□□ 0.66
TRUB1Q8WWH5 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRUB1Q8WWH5 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRUB1Q8WWH5 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRUB1Q8WWH5 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRUB1Q8WWH5 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TRUB1Q8WWH5 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRUB1Q8WWH5 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRUB1Q8WWH5 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRUB1Q8WWH5 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRUB1Q8WWH5 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.16■□□□□ 0.66
TRUB1Q8WWH5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRUB1Q8WWH5 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
TRUB1Q8WWH5 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRUB1Q8WWH5 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.16■□□□□ 0.66
TRUB1Q8WWH5 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRUB1Q8WWH5 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TRUB1Q8WWH5 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRUB1Q8WWH5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.16■□□□□ 0.66
TRUB1Q8WWH5 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRUB1Q8WWH5 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TRUB1Q8WWH5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRUB1Q8WWH5 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRUB1Q8WWH5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB1Q8WWH5 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB1Q8WWH5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TRUB1Q8WWH5 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB1Q8WWH5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.15■□□□□ 0.66
TRUB1Q8WWH5 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TRUB1Q8WWH5 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB1Q8WWH5 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB1Q8WWH5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB1Q8WWH5 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB1Q8WWH5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.15■□□□□ 0.66
TRUB1Q8WWH5 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB1Q8WWH5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.15■□□□□ 0.66
TRUB1Q8WWH5 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.15■□□□□ 0.66
TRUB1Q8WWH5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
TRUB1Q8WWH5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.15■□□□□ 0.66
TRUB1Q8WWH5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB1Q8WWH5 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB1Q8WWH5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB1Q8WWH5 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRUB1Q8WWH5 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
TRUB1Q8WWH5 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.14■□□□□ 0.66
TRUB1Q8WWH5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TRUB1Q8WWH5 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRUB1Q8WWH5 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRUB1Q8WWH5 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TRUB1Q8WWH5 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRUB1Q8WWH5 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRUB1Q8WWH5 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRUB1Q8WWH5 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
TRUB1Q8WWH5 AC010141.3-201ENST00000456659 717 ntBASIC19.14■□□□□ 0.65
TRUB1Q8WWH5 pRNA.6-201ENST00000610482 90 ntBASIC19.14■□□□□ 0.65
TRUB1Q8WWH5 pRNA.5-201ENST00000612139 90 ntBASIC19.14■□□□□ 0.65
TRUB1Q8WWH5 pRNA.11-201ENST00000618423 90 ntBASIC19.14■□□□□ 0.65
TRUB1Q8WWH5 pRNA.13-201ENST00000619112 90 ntBASIC19.14■□□□□ 0.65
TRUB1Q8WWH5 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.14■□□□□ 0.65
TRUB1Q8WWH5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.14■□□□□ 0.65
TRUB1Q8WWH5 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRUB1Q8WWH5 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRUB1Q8WWH5 AC003102.1-202ENST00000563394 1796 ntBASIC19.14■□□□□ 0.65
TRUB1Q8WWH5 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRUB1Q8WWH5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRUB1Q8WWH5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRUB1Q8WWH5 SMG8-203ENST00000578922 2178 ntBASIC19.13■□□□□ 0.65
TRUB1Q8WWH5 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRUB1Q8WWH5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRUB1Q8WWH5 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRUB1Q8WWH5 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TRUB1Q8WWH5 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRUB1Q8WWH5 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRUB1Q8WWH5 MIR4787-201ENST00000607364 84 ntBASIC19.13■□□□□ 0.65
TRUB1Q8WWH5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRUB1Q8WWH5 AC006128.1-201ENST00000624704 1661 ntBASIC19.13■□□□□ 0.65
TRUB1Q8WWH5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms