Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PTCD2Q8WV60 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.22■□□□□ 0.99
PTCD2Q8WV60 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.22■□□□□ 0.99
PTCD2Q8WV60 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTCD2Q8WV60 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.22■□□□□ 0.99
PTCD2Q8WV60 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PTCD2Q8WV60 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PTCD2Q8WV60 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.22■□□□□ 0.99
PTCD2Q8WV60 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTCD2Q8WV60 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTCD2Q8WV60 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTCD2Q8WV60 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTCD2Q8WV60 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTCD2Q8WV60 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.21■□□□□ 0.99
PTCD2Q8WV60 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.21■□□□□ 0.99
PTCD2Q8WV60 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTCD2Q8WV60 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTCD2Q8WV60 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.21■□□□□ 0.99
PTCD2Q8WV60 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.21■□□□□ 0.99
PTCD2Q8WV60 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTCD2Q8WV60 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PTCD2Q8WV60 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.21■□□□□ 0.99
PTCD2Q8WV60 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTCD2Q8WV60 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.21■□□□□ 0.99
PTCD2Q8WV60 PKD1P6-201ENST00000343738 4769 ntBASIC21.2■□□□□ 0.98
PTCD2Q8WV60 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.2■□□□□ 0.98
PTCD2Q8WV60 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PTCD2Q8WV60 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PTCD2Q8WV60 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTCD2Q8WV60 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.2■□□□□ 0.98
PTCD2Q8WV60 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.2■□□□□ 0.98
PTCD2Q8WV60 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.2■□□□□ 0.98
PTCD2Q8WV60 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTCD2Q8WV60 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTCD2Q8WV60 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTCD2Q8WV60 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTCD2Q8WV60 AL049796.1-201ENST00000565336 1766 ntBASIC21.2■□□□□ 0.98
PTCD2Q8WV60 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTCD2Q8WV60 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.2■□□□□ 0.98
PTCD2Q8WV60 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTCD2Q8WV60 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTCD2Q8WV60 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PTCD2Q8WV60 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PTCD2Q8WV60 AF106564.1-201ENST00000607058 2553 ntBASIC21.19■□□□□ 0.98
PTCD2Q8WV60 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTCD2Q8WV60 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PTCD2Q8WV60 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.19■□□□□ 0.98
PTCD2Q8WV60 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTCD2Q8WV60 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.19■□□□□ 0.98
PTCD2Q8WV60 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.19■□□□□ 0.98
PTCD2Q8WV60 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.19■□□□□ 0.98
PTCD2Q8WV60 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTCD2Q8WV60 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTCD2Q8WV60 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTCD2Q8WV60 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTCD2Q8WV60 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.18■□□□□ 0.98
PTCD2Q8WV60 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
PTCD2Q8WV60 AC079140.4-201ENST00000507448 529 ntBASIC21.18■□□□□ 0.98
PTCD2Q8WV60 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.18■□□□□ 0.98
PTCD2Q8WV60 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.18■□□□□ 0.98
PTCD2Q8WV60 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.18■□□□□ 0.98
PTCD2Q8WV60 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PTCD2Q8WV60 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTCD2Q8WV60 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTCD2Q8WV60 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTCD2Q8WV60 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTCD2Q8WV60 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTCD2Q8WV60 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTCD2Q8WV60 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PTCD2Q8WV60 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.17■□□□□ 0.98
PTCD2Q8WV60 AC004911.1-201ENST00000416316 871 ntBASIC21.17■□□□□ 0.98
PTCD2Q8WV60 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.17■□□□□ 0.98
PTCD2Q8WV60 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.17■□□□□ 0.98
PTCD2Q8WV60 AL137784.2-201ENST00000607332 1000 ntBASIC21.17■□□□□ 0.98
PTCD2Q8WV60 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PTCD2Q8WV60 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTCD2Q8WV60 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTCD2Q8WV60 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
PTCD2Q8WV60 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PTCD2Q8WV60 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTCD2Q8WV60 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.16■□□□□ 0.98
PTCD2Q8WV60 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.16■□□□□ 0.98
PTCD2Q8WV60 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTCD2Q8WV60 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.16■□□□□ 0.98
PTCD2Q8WV60 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTCD2Q8WV60 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTCD2Q8WV60 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.16■□□□□ 0.98
PTCD2Q8WV60 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.16■□□□□ 0.98
PTCD2Q8WV60 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.16■□□□□ 0.98
PTCD2Q8WV60 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.16■□□□□ 0.98
PTCD2Q8WV60 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTCD2Q8WV60 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTCD2Q8WV60 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PTCD2Q8WV60 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.15■□□□□ 0.98
PTCD2Q8WV60 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTCD2Q8WV60 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTCD2Q8WV60 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
PTCD2Q8WV60 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.15■□□□□ 0.98
PTCD2Q8WV60 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.15■□□□□ 0.98
PTCD2Q8WV60 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms