Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.81■■□□□ 1.08
SH3RF2Q8TEC5 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3RF2Q8TEC5 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SH3RF2Q8TEC5 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SH3RF2Q8TEC5 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.81■■□□□ 1.08
SH3RF2Q8TEC5 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SH3RF2Q8TEC5 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SH3RF2Q8TEC5 KRT18P6-201ENST00000555540 1265 ntBASIC21.81■■□□□ 1.08
SH3RF2Q8TEC5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.81■■□□□ 1.08
SH3RF2Q8TEC5 AC069236.1-201ENST00000604339 616 ntBASIC21.81■■□□□ 1.08
SH3RF2Q8TEC5 AC016405.3-201ENST00000607710 860 ntBASIC21.81■■□□□ 1.08
SH3RF2Q8TEC5 OR10C1-204ENST00000622521 1039 ntBASIC21.81■■□□□ 1.08
SH3RF2Q8TEC5 AC133041.1-202ENST00000642053 222 ntBASIC21.81■■□□□ 1.08
SH3RF2Q8TEC5 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3RF2Q8TEC5 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SH3RF2Q8TEC5 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH3RF2Q8TEC5 MKRN4P-201ENST00000444706 1521 ntBASIC21.8■■□□□ 1.08
SH3RF2Q8TEC5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.8■■□□□ 1.08
SH3RF2Q8TEC5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.8■■□□□ 1.08
SH3RF2Q8TEC5 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SH3RF2Q8TEC5 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH3RF2Q8TEC5 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
SH3RF2Q8TEC5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SH3RF2Q8TEC5 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.8■■□□□ 1.08
SH3RF2Q8TEC5 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH3RF2Q8TEC5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SH3RF2Q8TEC5 AC093787.1-201ENST00000450396 207 ntBASIC21.8■■□□□ 1.08
SH3RF2Q8TEC5 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.8■■□□□ 1.08
SH3RF2Q8TEC5 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.8■■□□□ 1.08
SH3RF2Q8TEC5 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.8■■□□□ 1.08
SH3RF2Q8TEC5 LINC00565-201ENST00000562710 2331 ntBASIC21.8■■□□□ 1.08
SH3RF2Q8TEC5 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
SH3RF2Q8TEC5 ECEL1P1-201ENST00000373592 1742 ntBASIC21.8■■□□□ 1.08
SH3RF2Q8TEC5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SH3RF2Q8TEC5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SH3RF2Q8TEC5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
SH3RF2Q8TEC5 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SH3RF2Q8TEC5 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SH3RF2Q8TEC5 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3RF2Q8TEC5 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SH3RF2Q8TEC5 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.79■■□□□ 1.08
SH3RF2Q8TEC5 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.79■■□□□ 1.08
SH3RF2Q8TEC5 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.79■■□□□ 1.08
SH3RF2Q8TEC5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.79■■□□□ 1.08
SH3RF2Q8TEC5 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.79■■□□□ 1.08
SH3RF2Q8TEC5 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.79■■□□□ 1.08
SH3RF2Q8TEC5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SH3RF2Q8TEC5 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3RF2Q8TEC5 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3RF2Q8TEC5 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.79■■□□□ 1.08
SH3RF2Q8TEC5 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SH3RF2Q8TEC5 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SH3RF2Q8TEC5 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3RF2Q8TEC5 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3RF2Q8TEC5 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SH3RF2Q8TEC5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SH3RF2Q8TEC5 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SH3RF2Q8TEC5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3RF2Q8TEC5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3RF2Q8TEC5 MIPEPP3-201ENST00000412105 444 ntBASIC21.78■■□□□ 1.08
SH3RF2Q8TEC5 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.78■■□□□ 1.08
SH3RF2Q8TEC5 AC073210.2-201ENST00000430369 194 ntBASIC21.78■■□□□ 1.08
SH3RF2Q8TEC5 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
SH3RF2Q8TEC5 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
SH3RF2Q8TEC5 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.78■■□□□ 1.08
SH3RF2Q8TEC5 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SH3RF2Q8TEC5 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SH3RF2Q8TEC5 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3RF2Q8TEC5 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3RF2Q8TEC5 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3RF2Q8TEC5 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.77■■□□□ 1.08
SH3RF2Q8TEC5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3RF2Q8TEC5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3RF2Q8TEC5 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SH3RF2Q8TEC5 AC010542.4-201ENST00000563151 1910 ntBASIC21.77■■□□□ 1.08
SH3RF2Q8TEC5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.77■■□□□ 1.08
SH3RF2Q8TEC5 MIR4758-201ENST00000577688 71 ntBASIC21.77■■□□□ 1.08
SH3RF2Q8TEC5 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SH3RF2Q8TEC5 AL591742.1-201ENST00000604433 565 ntBASIC21.77■■□□□ 1.08
SH3RF2Q8TEC5 AC243732.1-201ENST00000612648 864 ntBASIC21.77■■□□□ 1.08
SH3RF2Q8TEC5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.77■■□□□ 1.08
SH3RF2Q8TEC5 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
SH3RF2Q8TEC5 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SH3RF2Q8TEC5 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SH3RF2Q8TEC5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
SH3RF2Q8TEC5 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3RF2Q8TEC5 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3RF2Q8TEC5 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3RF2Q8TEC5 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3RF2Q8TEC5 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3RF2Q8TEC5 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.76■■□□□ 1.07
SH3RF2Q8TEC5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SH3RF2Q8TEC5 AL512625.2-201ENST00000417533 625 ntBASIC21.76■■□□□ 1.07
SH3RF2Q8TEC5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SH3RF2Q8TEC5 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.76■■□□□ 1.07
SH3RF2Q8TEC5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3RF2Q8TEC5 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3RF2Q8TEC5 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3RF2Q8TEC5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3RF2Q8TEC5 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms