Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.83■□□□□ 0.77
SNIP1Q8TAD8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SNIP1Q8TAD8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
SNIP1Q8TAD8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
SNIP1Q8TAD8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNIP1Q8TAD8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SNIP1Q8TAD8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SNIP1Q8TAD8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SNIP1Q8TAD8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
SNIP1Q8TAD8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNIP1Q8TAD8 KRT17P1-201ENST00000399211 1546 ntBASIC19.82■□□□□ 0.76
SNIP1Q8TAD8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNIP1Q8TAD8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNIP1Q8TAD8 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNIP1Q8TAD8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SNIP1Q8TAD8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
SNIP1Q8TAD8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.82■□□□□ 0.76
SNIP1Q8TAD8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNIP1Q8TAD8 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.82■□□□□ 0.76
SNIP1Q8TAD8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.82■□□□□ 0.76
SNIP1Q8TAD8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNIP1Q8TAD8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNIP1Q8TAD8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNIP1Q8TAD8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNIP1Q8TAD8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
SNIP1Q8TAD8 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNIP1Q8TAD8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNIP1Q8TAD8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNIP1Q8TAD8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.81■□□□□ 0.76
SNIP1Q8TAD8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.81■□□□□ 0.76
SNIP1Q8TAD8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNIP1Q8TAD8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.81■□□□□ 0.76
SNIP1Q8TAD8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.81■□□□□ 0.76
SNIP1Q8TAD8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNIP1Q8TAD8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNIP1Q8TAD8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNIP1Q8TAD8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.81■□□□□ 0.76
SNIP1Q8TAD8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNIP1Q8TAD8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNIP1Q8TAD8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SNIP1Q8TAD8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.81■□□□□ 0.76
SNIP1Q8TAD8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNIP1Q8TAD8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SNIP1Q8TAD8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SNIP1Q8TAD8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNIP1Q8TAD8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.8■□□□□ 0.76
SNIP1Q8TAD8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.8■□□□□ 0.76
SNIP1Q8TAD8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNIP1Q8TAD8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNIP1Q8TAD8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.8■□□□□ 0.76
SNIP1Q8TAD8 PNMA6B-201ENST00000538162 1200 ntBASIC19.8■□□□□ 0.76
SNIP1Q8TAD8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNIP1Q8TAD8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.8■□□□□ 0.76
SNIP1Q8TAD8 AC100791.3-201ENST00000617619 330 ntBASIC19.8■□□□□ 0.76
SNIP1Q8TAD8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SNIP1Q8TAD8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNIP1Q8TAD8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNIP1Q8TAD8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SNIP1Q8TAD8 LINC00526-201ENST00000581067 1875 ntBASIC19.79■□□□□ 0.76
SNIP1Q8TAD8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNIP1Q8TAD8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SNIP1Q8TAD8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNIP1Q8TAD8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNIP1Q8TAD8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.79■□□□□ 0.76
SNIP1Q8TAD8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.79■□□□□ 0.76
SNIP1Q8TAD8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.79■□□□□ 0.76
SNIP1Q8TAD8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SNIP1Q8TAD8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNIP1Q8TAD8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNIP1Q8TAD8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNIP1Q8TAD8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNIP1Q8TAD8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SNIP1Q8TAD8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
SNIP1Q8TAD8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SNIP1Q8TAD8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNIP1Q8TAD8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.78■□□□□ 0.76
SNIP1Q8TAD8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNIP1Q8TAD8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNIP1Q8TAD8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.78■□□□□ 0.76
SNIP1Q8TAD8 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNIP1Q8TAD8 BX088651.1-201ENST00000540551 451 ntBASIC19.78■□□□□ 0.76
SNIP1Q8TAD8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.78■□□□□ 0.76
SNIP1Q8TAD8 FAM21FP-204ENST00000608637 956 ntBASIC19.78■□□□□ 0.76
SNIP1Q8TAD8 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNIP1Q8TAD8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNIP1Q8TAD8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNIP1Q8TAD8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SNIP1Q8TAD8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNIP1Q8TAD8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
SNIP1Q8TAD8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNIP1Q8TAD8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNIP1Q8TAD8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNIP1Q8TAD8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNIP1Q8TAD8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNIP1Q8TAD8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.77■□□□□ 0.76
SNIP1Q8TAD8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNIP1Q8TAD8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SNIP1Q8TAD8 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.77■□□□□ 0.76
SNIP1Q8TAD8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNIP1Q8TAD8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms