Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC01006Q8NI28 PKM-204ENST00000449901 2526 ntTSL 2 BASIC16.4■□□□□ 0.22
LINC01006Q8NI28 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINC01006Q8NI28 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC01006Q8NI28 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LINC01006Q8NI28 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC01006Q8NI28 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LINC01006Q8NI28 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.39■□□□□ 0.21
LINC01006Q8NI28 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.39■□□□□ 0.21
LINC01006Q8NI28 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.39■□□□□ 0.21
LINC01006Q8NI28 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.39■□□□□ 0.21
LINC01006Q8NI28 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC01006Q8NI28 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC01006Q8NI28 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC01006Q8NI28 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LINC01006Q8NI28 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01006Q8NI28 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LINC01006Q8NI28 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.38■□□□□ 0.21
LINC01006Q8NI28 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LINC01006Q8NI28 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01006Q8NI28 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01006Q8NI28 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01006Q8NI28 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01006Q8NI28 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.38■□□□□ 0.21
LINC01006Q8NI28 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.38■□□□□ 0.21
LINC01006Q8NI28 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01006Q8NI28 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01006Q8NI28 AP003097.1-201ENST00000530657 1135 ntBASIC16.38■□□□□ 0.21
LINC01006Q8NI28 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01006Q8NI28 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.38■□□□□ 0.21
LINC01006Q8NI28 CYP2T3P-201ENST00000601990 817 ntBASIC16.38■□□□□ 0.21
LINC01006Q8NI28 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.38■□□□□ 0.21
LINC01006Q8NI28 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01006Q8NI28 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01006Q8NI28 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
LINC01006Q8NI28 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01006Q8NI28 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
LINC01006Q8NI28 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.38■□□□□ 0.21
LINC01006Q8NI28 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01006Q8NI28 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01006Q8NI28 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.38■□□□□ 0.21
LINC01006Q8NI28 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.37■□□□□ 0.21
LINC01006Q8NI28 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.37■□□□□ 0.21
LINC01006Q8NI28 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LINC01006Q8NI28 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
LINC01006Q8NI28 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.37■□□□□ 0.21
LINC01006Q8NI28 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.37■□□□□ 0.21
LINC01006Q8NI28 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC01006Q8NI28 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
LINC01006Q8NI28 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.37■□□□□ 0.21
LINC01006Q8NI28 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.37■□□□□ 0.21
LINC01006Q8NI28 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.37■□□□□ 0.21
LINC01006Q8NI28 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC01006Q8NI28 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.37■□□□□ 0.21
LINC01006Q8NI28 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC01006Q8NI28 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LINC01006Q8NI28 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LINC01006Q8NI28 AC026471.6-201ENST00000622954 1905 ntBASIC16.37■□□□□ 0.21
LINC01006Q8NI28 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.37■□□□□ 0.21
LINC01006Q8NI28 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LINC01006Q8NI28 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LINC01006Q8NI28 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC01006Q8NI28 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC01006Q8NI28 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC01006Q8NI28 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LINC01006Q8NI28 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
LINC01006Q8NI28 C11orf96-202ENST00000528572 1834 ntBASIC16.36■□□□□ 0.21
LINC01006Q8NI28 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC01006Q8NI28 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LINC01006Q8NI28 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.36■□□□□ 0.21
LINC01006Q8NI28 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.36■□□□□ 0.21
LINC01006Q8NI28 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.36■□□□□ 0.21
LINC01006Q8NI28 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.36■□□□□ 0.21
LINC01006Q8NI28 AC073648.6-201ENST00000641589 218 ntBASIC16.36■□□□□ 0.21
LINC01006Q8NI28 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC01006Q8NI28 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.36■□□□□ 0.21
LINC01006Q8NI28 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LINC01006Q8NI28 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC01006Q8NI28 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC16.36■□□□□ 0.21
LINC01006Q8NI28 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01006Q8NI28 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
LINC01006Q8NI28 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01006Q8NI28 AC080038.3-201ENST00000623346 1952 ntBASIC16.35■□□□□ 0.21
LINC01006Q8NI28 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01006Q8NI28 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
LINC01006Q8NI28 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.35■□□□□ 0.21
LINC01006Q8NI28 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.35■□□□□ 0.21
LINC01006Q8NI28 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.35■□□□□ 0.21
LINC01006Q8NI28 AL589743.5-201ENST00000616611 1050 ntBASIC16.35■□□□□ 0.21
LINC01006Q8NI28 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01006Q8NI28 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01006Q8NI28 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
LINC01006Q8NI28 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01006Q8NI28 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
LINC01006Q8NI28 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01006Q8NI28 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01006Q8NI28 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01006Q8NI28 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC01006Q8NI28 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.34■□□□□ 0.21
LINC01006Q8NI28 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms