Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFWD2Q8NHY2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFWD2Q8NHY2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFWD2Q8NHY2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFWD2Q8NHY2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.7■□□□□ 0.9
RFWD2Q8NHY2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFWD2Q8NHY2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFWD2Q8NHY2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFWD2Q8NHY2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFWD2Q8NHY2 AC133637.1-201ENST00000624115 1537 ntBASIC20.69■□□□□ 0.9
RFWD2Q8NHY2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RFWD2Q8NHY2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RFWD2Q8NHY2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFWD2Q8NHY2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.69■□□□□ 0.9
RFWD2Q8NHY2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.69■□□□□ 0.9
RFWD2Q8NHY2 UNC93B8-201ENST00000511903 705 ntBASIC20.69■□□□□ 0.9
RFWD2Q8NHY2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.69■□□□□ 0.9
RFWD2Q8NHY2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFWD2Q8NHY2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFWD2Q8NHY2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFWD2Q8NHY2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFWD2Q8NHY2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFWD2Q8NHY2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFWD2Q8NHY2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.69■□□□□ 0.9
RFWD2Q8NHY2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RFWD2Q8NHY2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.69■□□□□ 0.9
RFWD2Q8NHY2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.69■□□□□ 0.9
RFWD2Q8NHY2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.68■□□□□ 0.9
RFWD2Q8NHY2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFWD2Q8NHY2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFWD2Q8NHY2 AC027702.1-201ENST00000563810 1770 ntBASIC20.68■□□□□ 0.9
RFWD2Q8NHY2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.68■□□□□ 0.9
RFWD2Q8NHY2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFWD2Q8NHY2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.68■□□□□ 0.9
RFWD2Q8NHY2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFWD2Q8NHY2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFWD2Q8NHY2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFWD2Q8NHY2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFWD2Q8NHY2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFWD2Q8NHY2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFWD2Q8NHY2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFWD2Q8NHY2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFWD2Q8NHY2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFWD2Q8NHY2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFWD2Q8NHY2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFWD2Q8NHY2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFWD2Q8NHY2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFWD2Q8NHY2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFWD2Q8NHY2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFWD2Q8NHY2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFWD2Q8NHY2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RFWD2Q8NHY2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RFWD2Q8NHY2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFWD2Q8NHY2 KRT16P3-201ENST00000439127 1283 ntBASIC20.66■□□□□ 0.9
RFWD2Q8NHY2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RFWD2Q8NHY2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.66■□□□□ 0.9
RFWD2Q8NHY2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFWD2Q8NHY2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RFWD2Q8NHY2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFWD2Q8NHY2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFWD2Q8NHY2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.66■□□□□ 0.9
RFWD2Q8NHY2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RFWD2Q8NHY2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RFWD2Q8NHY2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.66■□□□□ 0.9
RFWD2Q8NHY2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.66■□□□□ 0.9
RFWD2Q8NHY2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.66■□□□□ 0.9
RFWD2Q8NHY2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.66■□□□□ 0.9
RFWD2Q8NHY2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFWD2Q8NHY2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFWD2Q8NHY2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFWD2Q8NHY2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.65■□□□□ 0.9
RFWD2Q8NHY2 GUSBP5-201ENST00000418136 578 ntBASIC20.65■□□□□ 0.9
RFWD2Q8NHY2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFWD2Q8NHY2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RFWD2Q8NHY2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.65■□□□□ 0.9
RFWD2Q8NHY2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFWD2Q8NHY2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFWD2Q8NHY2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFWD2Q8NHY2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFWD2Q8NHY2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.65■□□□□ 0.9
RFWD2Q8NHY2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.64■□□□□ 0.9
RFWD2Q8NHY2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RFWD2Q8NHY2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RFWD2Q8NHY2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFWD2Q8NHY2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.64■□□□□ 0.89
RFWD2Q8NHY2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RFWD2Q8NHY2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.64■□□□□ 0.89
RFWD2Q8NHY2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFWD2Q8NHY2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFWD2Q8NHY2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.64■□□□□ 0.89
RFWD2Q8NHY2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFWD2Q8NHY2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.64■□□□□ 0.89
RFWD2Q8NHY2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RFWD2Q8NHY2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFWD2Q8NHY2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFWD2Q8NHY2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFWD2Q8NHY2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFWD2Q8NHY2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RFWD2Q8NHY2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFWD2Q8NHY2 AC112907.3-201ENST00000577781 2400 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms