Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
CFAP43Q8NDM7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
CFAP43Q8NDM7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
CFAP43Q8NDM7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC33.1■■■□□ 2.89
CFAP43Q8NDM7 C9orf163-202ENST00000624034 2573 ntBASIC33.1■■■□□ 2.89
CFAP43Q8NDM7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC33.1■■■□□ 2.89
CFAP43Q8NDM7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
CFAP43Q8NDM7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC33.09■■■□□ 2.89
CFAP43Q8NDM7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC33.09■■■□□ 2.89
CFAP43Q8NDM7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
CFAP43Q8NDM7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC33.09■■■□□ 2.89
CFAP43Q8NDM7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC33.09■■■□□ 2.89
CFAP43Q8NDM7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
CFAP43Q8NDM7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
CFAP43Q8NDM7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC33.09■■■□□ 2.89
CFAP43Q8NDM7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC33.08■■■□□ 2.89
CFAP43Q8NDM7 FAM210CP-201ENST00000445714 574 ntBASIC33.08■■■□□ 2.89
CFAP43Q8NDM7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC33.08■■■□□ 2.89
CFAP43Q8NDM7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
CFAP43Q8NDM7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC33.08■■■□□ 2.89
CFAP43Q8NDM7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC33.08■■■□□ 2.89
CFAP43Q8NDM7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
CFAP43Q8NDM7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
CFAP43Q8NDM7 AC003102.1-202ENST00000563394 1796 ntBASIC33.08■■■□□ 2.89
CFAP43Q8NDM7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC33.08■■■□□ 2.89
CFAP43Q8NDM7 AC026471.6-201ENST00000622954 1905 ntBASIC33.08■■■□□ 2.89
CFAP43Q8NDM7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
CFAP43Q8NDM7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
CFAP43Q8NDM7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
CFAP43Q8NDM7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC33.07■■■□□ 2.89
CFAP43Q8NDM7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC33.07■■■□□ 2.89
CFAP43Q8NDM7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC33.07■■■□□ 2.89
CFAP43Q8NDM7 GXYLT1P3-201ENST00000453058 1193 ntBASIC33.07■■■□□ 2.89
CFAP43Q8NDM7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC33.07■■■□□ 2.89
CFAP43Q8NDM7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC33.07■■■□□ 2.89
CFAP43Q8NDM7 KRT16P2-201ENST00000414673 1423 ntBASIC33.07■■■□□ 2.88
CFAP43Q8NDM7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
CFAP43Q8NDM7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
CFAP43Q8NDM7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC33.07■■■□□ 2.88
CFAP43Q8NDM7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CFAP43Q8NDM7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC33.06■■■□□ 2.88
CFAP43Q8NDM7 MIR718-201ENST00000390190 70 ntBASIC33.06■■■□□ 2.88
CFAP43Q8NDM7 MAX-217ENST00000557277 728 ntTSL 3 BASIC33.06■■■□□ 2.88
CFAP43Q8NDM7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC33.06■■■□□ 2.88
CFAP43Q8NDM7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CFAP43Q8NDM7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC33.06■■■□□ 2.88
CFAP43Q8NDM7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
CFAP43Q8NDM7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CFAP43Q8NDM7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CFAP43Q8NDM7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC33.06■■■□□ 2.88
CFAP43Q8NDM7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC33.05■■■□□ 2.88
CFAP43Q8NDM7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC33.05■■■□□ 2.88
CFAP43Q8NDM7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC33.05■■■□□ 2.88
CFAP43Q8NDM7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
CFAP43Q8NDM7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC33.05■■■□□ 2.88
CFAP43Q8NDM7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
CFAP43Q8NDM7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC33.05■■■□□ 2.88
CFAP43Q8NDM7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
CFAP43Q8NDM7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
CFAP43Q8NDM7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
CFAP43Q8NDM7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
CFAP43Q8NDM7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC33.04■■■□□ 2.88
CFAP43Q8NDM7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC33.04■■■□□ 2.88
CFAP43Q8NDM7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC33.04■■■□□ 2.88
CFAP43Q8NDM7 AC060766.5-201ENST00000590539 871 ntBASIC33.04■■■□□ 2.88
CFAP43Q8NDM7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
CFAP43Q8NDM7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CFAP43Q8NDM7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC33.04■■■□□ 2.88
CFAP43Q8NDM7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC33.04■■■□□ 2.88
CFAP43Q8NDM7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CFAP43Q8NDM7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
CFAP43Q8NDM7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC33.04■■■□□ 2.88
CFAP43Q8NDM7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC33.04■■■□□ 2.88
CFAP43Q8NDM7 LINC01023-201ENST00000606054 436 ntBASIC33.04■■■□□ 2.88
CFAP43Q8NDM7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC33.04■■■□□ 2.88
CFAP43Q8NDM7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC33.04■■■□□ 2.88
CFAP43Q8NDM7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC33.03■■■□□ 2.88
CFAP43Q8NDM7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
CFAP43Q8NDM7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC33.03■■■□□ 2.88
CFAP43Q8NDM7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC33.03■■■□□ 2.88
CFAP43Q8NDM7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
CFAP43Q8NDM7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC33.03■■■□□ 2.88
CFAP43Q8NDM7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
CFAP43Q8NDM7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC33.03■■■□□ 2.88
CFAP43Q8NDM7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
CFAP43Q8NDM7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC33.02■■■□□ 2.88
CFAP43Q8NDM7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
CFAP43Q8NDM7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC33.02■■■□□ 2.88
CFAP43Q8NDM7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CFAP43Q8NDM7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC33.02■■■□□ 2.88
CFAP43Q8NDM7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC33.02■■■□□ 2.88
CFAP43Q8NDM7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
CFAP43Q8NDM7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
CFAP43Q8NDM7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
CFAP43Q8NDM7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
CFAP43Q8NDM7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC33.02■■■□□ 2.88
CFAP43Q8NDM7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC33.02■■■□□ 2.88
CFAP43Q8NDM7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC33.02■■■□□ 2.88
CFAP43Q8NDM7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC33.02■■■□□ 2.88
CFAP43Q8NDM7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC33.02■■■□□ 2.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms