Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC89Q8N998 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC89Q8N998 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CCDC89Q8N998 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CCDC89Q8N998 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC89Q8N998 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC89Q8N998 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC89Q8N998 FEM1AP1-201ENST00000431297 1995 ntBASIC21.7■■□□□ 1.06
CCDC89Q8N998 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC89Q8N998 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC89Q8N998 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC89Q8N998 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CCDC89Q8N998 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC89Q8N998 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC89Q8N998 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC89Q8N998 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC89Q8N998 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.69■■□□□ 1.06
CCDC89Q8N998 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC89Q8N998 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CCDC89Q8N998 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CCDC89Q8N998 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC89Q8N998 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC89Q8N998 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC89Q8N998 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC89Q8N998 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC89Q8N998 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC89Q8N998 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC89Q8N998 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC89Q8N998 LINC01006-201ENST00000333319 2292 ntBASIC21.69■■□□□ 1.06
CCDC89Q8N998 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC89Q8N998 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC89Q8N998 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC89Q8N998 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC89Q8N998 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC89Q8N998 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC89Q8N998 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC89Q8N998 AC008764.7-201ENST00000593779 1081 ntBASIC21.68■■□□□ 1.06
CCDC89Q8N998 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC89Q8N998 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC89Q8N998 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC89Q8N998 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC89Q8N998 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC89Q8N998 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC89Q8N998 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC89Q8N998 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC89Q8N998 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC89Q8N998 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC89Q8N998 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC89Q8N998 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
CCDC89Q8N998 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CCDC89Q8N998 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CCDC89Q8N998 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC89Q8N998 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC89Q8N998 AC008406.3-201ENST00000620001 1374 ntBASIC21.67■■□□□ 1.06
CCDC89Q8N998 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.67■■□□□ 1.06
CCDC89Q8N998 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC89Q8N998 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC89Q8N998 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.67■■□□□ 1.06
CCDC89Q8N998 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC89Q8N998 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC89Q8N998 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC89Q8N998 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.66■■□□□ 1.06
CCDC89Q8N998 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.66■■□□□ 1.06
CCDC89Q8N998 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC89Q8N998 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC89Q8N998 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
CCDC89Q8N998 AC009237.3-201ENST00000393279 1427 ntBASIC21.66■■□□□ 1.06
CCDC89Q8N998 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
CCDC89Q8N998 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC89Q8N998 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC89Q8N998 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
CCDC89Q8N998 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.66■■□□□ 1.06
CCDC89Q8N998 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.66■■□□□ 1.06
CCDC89Q8N998 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC89Q8N998 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC89Q8N998 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC89Q8N998 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CCDC89Q8N998 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CCDC89Q8N998 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC89Q8N998 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC89Q8N998 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC89Q8N998 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CCDC89Q8N998 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC89Q8N998 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC89Q8N998 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC89Q8N998 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC89Q8N998 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC89Q8N998 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.65■■□□□ 1.06
CCDC89Q8N998 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.65■■□□□ 1.06
CCDC89Q8N998 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC89Q8N998 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.65■■□□□ 1.06
CCDC89Q8N998 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.65■■□□□ 1.06
CCDC89Q8N998 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC89Q8N998 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC89Q8N998 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
CCDC89Q8N998 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC89Q8N998 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC89Q8N998 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC89Q8N998 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CCDC89Q8N998 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms