Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 AC092368.3-202ENST00000574180 1591 ntBASIC16.42■□□□□ 0.22
C3orf56Q8N813 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C3orf56Q8N813 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
C3orf56Q8N813 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC16.42■□□□□ 0.22
C3orf56Q8N813 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
C3orf56Q8N813 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
C3orf56Q8N813 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.42■□□□□ 0.22
C3orf56Q8N813 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
C3orf56Q8N813 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C3orf56Q8N813 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C3orf56Q8N813 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C3orf56Q8N813 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
C3orf56Q8N813 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C3orf56Q8N813 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C3orf56Q8N813 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C3orf56Q8N813 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
C3orf56Q8N813 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C3orf56Q8N813 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
C3orf56Q8N813 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C3orf56Q8N813 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C3orf56Q8N813 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.41■□□□□ 0.22
C3orf56Q8N813 PNMA6B-201ENST00000538162 1200 ntBASIC16.41■□□□□ 0.22
C3orf56Q8N813 AC243732.1-201ENST00000612648 864 ntBASIC16.41■□□□□ 0.22
C3orf56Q8N813 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
C3orf56Q8N813 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C3orf56Q8N813 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C3orf56Q8N813 AL139125.2-201ENST00000623134 1869 ntBASIC16.41■□□□□ 0.22
C3orf56Q8N813 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
C3orf56Q8N813 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.41■□□□□ 0.22
C3orf56Q8N813 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
C3orf56Q8N813 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C3orf56Q8N813 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C3orf56Q8N813 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
C3orf56Q8N813 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C3orf56Q8N813 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
C3orf56Q8N813 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
C3orf56Q8N813 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
C3orf56Q8N813 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.4■□□□□ 0.22
C3orf56Q8N813 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C3orf56Q8N813 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.4■□□□□ 0.22
C3orf56Q8N813 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
C3orf56Q8N813 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
C3orf56Q8N813 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C3orf56Q8N813 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.4■□□□□ 0.22
C3orf56Q8N813 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C3orf56Q8N813 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
C3orf56Q8N813 AL355472.2-201ENST00000422958 438 ntBASIC16.4■□□□□ 0.22
C3orf56Q8N813 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.4■□□□□ 0.22
C3orf56Q8N813 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
C3orf56Q8N813 AC133561.5-201ENST00000635547 218 ntBASIC16.4■□□□□ 0.22
C3orf56Q8N813 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C3orf56Q8N813 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.4■□□□□ 0.22
C3orf56Q8N813 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C3orf56Q8N813 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC16.4■□□□□ 0.22
C3orf56Q8N813 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
C3orf56Q8N813 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C3orf56Q8N813 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
C3orf56Q8N813 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C3orf56Q8N813 KRT17P1-201ENST00000399211 1546 ntBASIC16.4■□□□□ 0.22
C3orf56Q8N813 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
C3orf56Q8N813 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C3orf56Q8N813 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
C3orf56Q8N813 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
C3orf56Q8N813 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
C3orf56Q8N813 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
C3orf56Q8N813 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.39■□□□□ 0.21
C3orf56Q8N813 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.39■□□□□ 0.21
C3orf56Q8N813 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C3orf56Q8N813 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.39■□□□□ 0.21
C3orf56Q8N813 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C3orf56Q8N813 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.39■□□□□ 0.21
C3orf56Q8N813 AL589743.5-201ENST00000616611 1050 ntBASIC16.39■□□□□ 0.21
C3orf56Q8N813 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C3orf56Q8N813 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
C3orf56Q8N813 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
C3orf56Q8N813 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
C3orf56Q8N813 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
C3orf56Q8N813 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C3orf56Q8N813 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C3orf56Q8N813 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.38■□□□□ 0.21
C3orf56Q8N813 AIRN-201ENST00000601203 4374 ntBASIC16.38■□□□□ 0.21
C3orf56Q8N813 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C3orf56Q8N813 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
C3orf56Q8N813 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
C3orf56Q8N813 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
C3orf56Q8N813 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C3orf56Q8N813 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
C3orf56Q8N813 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C3orf56Q8N813 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C3orf56Q8N813 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.38■□□□□ 0.21
C3orf56Q8N813 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C3orf56Q8N813 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.38■□□□□ 0.21
C3orf56Q8N813 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.38■□□□□ 0.21
C3orf56Q8N813 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.38■□□□□ 0.21
C3orf56Q8N813 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.38■□□□□ 0.21
C3orf56Q8N813 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.38■□□□□ 0.21
C3orf56Q8N813 AP001412.1-201ENST00000608405 714 ntBASIC16.38■□□□□ 0.21
C3orf56Q8N813 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
C3orf56Q8N813 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
C3orf56Q8N813 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms