Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFCAB3Q8N7B9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EFCAB3Q8N7B9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFCAB3Q8N7B9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.67■□□□□ 0.9
EFCAB3Q8N7B9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFCAB3Q8N7B9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EFCAB3Q8N7B9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFCAB3Q8N7B9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
EFCAB3Q8N7B9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.66■□□□□ 0.9
EFCAB3Q8N7B9 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFCAB3Q8N7B9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EFCAB3Q8N7B9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.66■□□□□ 0.9
EFCAB3Q8N7B9 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
EFCAB3Q8N7B9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
EFCAB3Q8N7B9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.66■□□□□ 0.9
EFCAB3Q8N7B9 AC087239.1-201ENST00000622671 572 ntBASIC20.66■□□□□ 0.9
EFCAB3Q8N7B9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.66■□□□□ 0.9
EFCAB3Q8N7B9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.66■□□□□ 0.9
EFCAB3Q8N7B9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
EFCAB3Q8N7B9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
EFCAB3Q8N7B9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.66■□□□□ 0.9
EFCAB3Q8N7B9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
EFCAB3Q8N7B9 AC026471.6-201ENST00000622954 1905 ntBASIC20.66■□□□□ 0.9
EFCAB3Q8N7B9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFCAB3Q8N7B9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFCAB3Q8N7B9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFCAB3Q8N7B9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFCAB3Q8N7B9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EFCAB3Q8N7B9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EFCAB3Q8N7B9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFCAB3Q8N7B9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.65■□□□□ 0.9
EFCAB3Q8N7B9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFCAB3Q8N7B9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFCAB3Q8N7B9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
EFCAB3Q8N7B9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.65■□□□□ 0.9
EFCAB3Q8N7B9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EFCAB3Q8N7B9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EFCAB3Q8N7B9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFCAB3Q8N7B9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFCAB3Q8N7B9 ID1-201ENST00000376105 1233 ntBASIC20.65■□□□□ 0.9
EFCAB3Q8N7B9 AC068587.7-201ENST00000641602 218 ntBASIC20.65■□□□□ 0.9
EFCAB3Q8N7B9 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EFCAB3Q8N7B9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
EFCAB3Q8N7B9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.65■□□□□ 0.9
EFCAB3Q8N7B9 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
EFCAB3Q8N7B9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
EFCAB3Q8N7B9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
EFCAB3Q8N7B9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
EFCAB3Q8N7B9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.64■□□□□ 0.9
EFCAB3Q8N7B9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.64■□□□□ 0.9
EFCAB3Q8N7B9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
EFCAB3Q8N7B9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
EFCAB3Q8N7B9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EFCAB3Q8N7B9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.64■□□□□ 0.89
EFCAB3Q8N7B9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EFCAB3Q8N7B9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.64■□□□□ 0.89
EFCAB3Q8N7B9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
EFCAB3Q8N7B9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EFCAB3Q8N7B9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EFCAB3Q8N7B9 AC004911.1-201ENST00000416316 871 ntBASIC20.64■□□□□ 0.89
EFCAB3Q8N7B9 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.64■□□□□ 0.89
EFCAB3Q8N7B9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EFCAB3Q8N7B9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EFCAB3Q8N7B9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
EFCAB3Q8N7B9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EFCAB3Q8N7B9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EFCAB3Q8N7B9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
EFCAB3Q8N7B9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EFCAB3Q8N7B9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
EFCAB3Q8N7B9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EFCAB3Q8N7B9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.63■□□□□ 0.89
EFCAB3Q8N7B9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
EFCAB3Q8N7B9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.63■□□□□ 0.89
EFCAB3Q8N7B9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.63■□□□□ 0.89
EFCAB3Q8N7B9 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.63■□□□□ 0.89
EFCAB3Q8N7B9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.63■□□□□ 0.89
EFCAB3Q8N7B9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.63■□□□□ 0.89
EFCAB3Q8N7B9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.63■□□□□ 0.89
EFCAB3Q8N7B9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.63■□□□□ 0.89
EFCAB3Q8N7B9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
EFCAB3Q8N7B9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
EFCAB3Q8N7B9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EFCAB3Q8N7B9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
EFCAB3Q8N7B9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
EFCAB3Q8N7B9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EFCAB3Q8N7B9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.63■□□□□ 0.89
EFCAB3Q8N7B9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EFCAB3Q8N7B9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.62■□□□□ 0.89
EFCAB3Q8N7B9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EFCAB3Q8N7B9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EFCAB3Q8N7B9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.62■□□□□ 0.89
EFCAB3Q8N7B9 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC20.62■□□□□ 0.89
EFCAB3Q8N7B9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EFCAB3Q8N7B9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.62■□□□□ 0.89
EFCAB3Q8N7B9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
EFCAB3Q8N7B9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
EFCAB3Q8N7B9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
EFCAB3Q8N7B9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.61■□□□□ 0.89
EFCAB3Q8N7B9 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EFCAB3Q8N7B9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms