Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TTC9BQ8N6N2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TTC9BQ8N6N2 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TTC9BQ8N6N2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TTC9BQ8N6N2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
TTC9BQ8N6N2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TTC9BQ8N6N2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC22.09■■□□□ 1.13
TTC9BQ8N6N2 KRT18P6-201ENST00000555540 1265 ntBASIC22.09■■□□□ 1.13
TTC9BQ8N6N2 AC008694.1-202ENST00000636953 945 ntBASIC22.09■■□□□ 1.13
TTC9BQ8N6N2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TTC9BQ8N6N2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
TTC9BQ8N6N2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
TTC9BQ8N6N2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TTC9BQ8N6N2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.08■■□□□ 1.13
TTC9BQ8N6N2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TTC9BQ8N6N2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
TTC9BQ8N6N2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
TTC9BQ8N6N2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.08■■□□□ 1.13
TTC9BQ8N6N2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.08■■□□□ 1.13
TTC9BQ8N6N2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.08■■□□□ 1.13
TTC9BQ8N6N2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TTC9BQ8N6N2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
TTC9BQ8N6N2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.07■■□□□ 1.12
TTC9BQ8N6N2 AC133561.1-201ENST00000568600 2415 ntBASIC22.07■■□□□ 1.12
TTC9BQ8N6N2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TTC9BQ8N6N2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TTC9BQ8N6N2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
TTC9BQ8N6N2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TTC9BQ8N6N2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
TTC9BQ8N6N2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TTC9BQ8N6N2 MIR4651-201ENST00000582622 73 ntBASIC22.07■■□□□ 1.12
TTC9BQ8N6N2 AC133041.1-202ENST00000642053 222 ntBASIC22.07■■□□□ 1.12
TTC9BQ8N6N2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.07■■□□□ 1.12
TTC9BQ8N6N2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TTC9BQ8N6N2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TTC9BQ8N6N2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.07■■□□□ 1.12
TTC9BQ8N6N2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.07■■□□□ 1.12
TTC9BQ8N6N2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TTC9BQ8N6N2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.06■■□□□ 1.12
TTC9BQ8N6N2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TTC9BQ8N6N2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TTC9BQ8N6N2 BX276092.2-201ENST00000417668 665 ntBASIC22.06■■□□□ 1.12
TTC9BQ8N6N2 AC091799.1-201ENST00000422823 811 ntBASIC22.06■■□□□ 1.12
TTC9BQ8N6N2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC22.06■■□□□ 1.12
TTC9BQ8N6N2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.06■■□□□ 1.12
TTC9BQ8N6N2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
TTC9BQ8N6N2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.06■■□□□ 1.12
TTC9BQ8N6N2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.06■■□□□ 1.12
TTC9BQ8N6N2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.06■■□□□ 1.12
TTC9BQ8N6N2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TTC9BQ8N6N2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TTC9BQ8N6N2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TTC9BQ8N6N2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TTC9BQ8N6N2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.06■■□□□ 1.12
TTC9BQ8N6N2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
TTC9BQ8N6N2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TTC9BQ8N6N2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
TTC9BQ8N6N2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC22.05■■□□□ 1.12
TTC9BQ8N6N2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
TTC9BQ8N6N2 AL512625.2-201ENST00000417533 625 ntBASIC22.05■■□□□ 1.12
TTC9BQ8N6N2 PPP1R14BP2-201ENST00000426284 444 ntBASIC22.05■■□□□ 1.12
TTC9BQ8N6N2 TSPY20P-201ENST00000450910 630 ntBASIC22.05■■□□□ 1.12
TTC9BQ8N6N2 RARRES2P4-201ENST00000514074 484 ntBASIC22.05■■□□□ 1.12
TTC9BQ8N6N2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC22.05■■□□□ 1.12
TTC9BQ8N6N2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22.05■■□□□ 1.12
TTC9BQ8N6N2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.05■■□□□ 1.12
TTC9BQ8N6N2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
TTC9BQ8N6N2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TTC9BQ8N6N2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
TTC9BQ8N6N2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TTC9BQ8N6N2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
TTC9BQ8N6N2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
TTC9BQ8N6N2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TTC9BQ8N6N2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TTC9BQ8N6N2 ECEL1P1-201ENST00000373592 1742 ntBASIC22.04■■□□□ 1.12
TTC9BQ8N6N2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TTC9BQ8N6N2 AC073210.2-201ENST00000430369 194 ntBASIC22.04■■□□□ 1.12
TTC9BQ8N6N2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC22.04■■□□□ 1.12
TTC9BQ8N6N2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.04■■□□□ 1.12
TTC9BQ8N6N2 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC22.04■■□□□ 1.12
TTC9BQ8N6N2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
TTC9BQ8N6N2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC22.04■■□□□ 1.12
TTC9BQ8N6N2 AC010980.2-201ENST00000587099 1412 ntBASIC22.04■■□□□ 1.12
TTC9BQ8N6N2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TTC9BQ8N6N2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TTC9BQ8N6N2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
TTC9BQ8N6N2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
TTC9BQ8N6N2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TTC9BQ8N6N2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TTC9BQ8N6N2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TTC9BQ8N6N2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TTC9BQ8N6N2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC22.03■■□□□ 1.12
TTC9BQ8N6N2 AL162412.1-201ENST00000567129 965 ntBASIC22.03■■□□□ 1.12
TTC9BQ8N6N2 MIR4758-201ENST00000577688 71 ntBASIC22.03■■□□□ 1.12
TTC9BQ8N6N2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TTC9BQ8N6N2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TTC9BQ8N6N2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TTC9BQ8N6N2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
TTC9BQ8N6N2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.03■■□□□ 1.12
TTC9BQ8N6N2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms